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Detailed information on CNT0014182


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q0WWW9|XYLL3_ARATH, E-value = 1e-153

BLAST vs NONCODE (A. thaliana): nothing found

Potentially orthologous lncRNAs:
CNT0001067 in G. max

Most similar lncRNAs:
CNT0001067, E-value = 2e-17 (G. max)

Expression of CNT0014182

Peptides detected in this lncRNA

>peptide 1 (277 aa)
MSWYNLSAVQLGLVVSGSLYGALIGSILAYPFADFLGRRRELIIAAILYLAGGSLTACAPGLGALLLGRLVYGLGIGLAMHGAPLYIAETCPSQIRGTLI
SLKELAIVLGILLGFFVGSYEIDVIGGWRYMFGFSAPIALLMGFGMWTLPPSPRWLLLRAIQGKGPLQEYKENAIGALSKLRGRPAGDKVSEKQIEDTII
SLKTAYTDEEAEGNFLEVLQGPSLKAFTIGGGLVLFQQITGQPSVLYYAGSILQSAGFSAAADAARVSVVIGIFKVS*

>peptide 2 (83 aa)
IKGWQCLAGFHKADKPLLPAQSRYLGVVPLTSNTGETAHALTKIRPTDIWSHSNSQGRFPLHLILVHKWVGIIRQWHSQNHHC*

>peptide 3 (71 aa)
MGWYNPTMALSKPPLLVPSNSWVLRGKKVIECRRNYPLIGRKKENLVGVHFVGCKGMLRLKEKEKKPSQGI*

Sequence

>CNT0014182
ATAAAAGGTTGGCAATGTTTGGCTGGGTTTCACAAAGCTGATAAACCTCTTCTTCCAGCTCAGTCTCGCTATCTCGGTGTTGTTCCTTTGACGTCTAATA
CAGGAGAGACAGCCCACGCACTTACAAAGATTAGGCCAACAGATATCTGGAGCCATTCAAATAGCCAAGGACGTTTCCCTCTACATTTAATACTGGTGCA
TAAATGGGTTGGTATAATCCGACAATGGCACTCTCAAAACCACCATTGCTAGTTCCATCCAACTCGTGGGTTTTGAGGGGTAAGAAGGTAATTGAATGTA
GAAGAAATTACCCATTGATTGGAAGGAAGAAGGAAAATTTAGTGGGTGTACATTTTGTGGGTTGTAAGGGAATGCTCAGACTGAAGGAGAAGGAGAAGAA
GCCGAGCCAGGGTATATAGAGGAATTCAGTTGGTCTTCTGTTATTTTGCCTTTTATCTTCCCAGCCCTAGGCGGTTTATTATTTGGCTATGATATTGGTG
CCACCTCAGGTGCTACCATCTCATTGCAGTCGCCTGAGCTTAGTGGAATGAGTTGGTACAACCTCTCAGCTGTTCAGCTTGGTCTTGTGGTCAGCGGTTC
CCTTTATGGGGCTCTTATTGGCTCCATACTCGCCTACCCATTTGCTGATTTCCTAGGAAGGAGGAGGGAACTGATCATAGCAGCCATTTTATATTTGGCT
GGCGGTTCACTAACTGCCTGTGCTCCAGGACTAGGGGCACTCTTGTTGGGTCGGCTTGTTTATGGACTAGGAATTGGCTTGGCAATGCATGGGGCACCTC
TATATATAGCAGAGACTTGTCCATCCCAAATCAGAGGGACATTAATCTCTTTAAAGGAGCTGGCAATAGTACTGGGTATTTTGCTGGGTTTTTTTGTAGG
TAGCTATGAAATTGATGTCATTGGAGGATGGCGTTACATGTTTGGATTTAGTGCTCCAATTGCTTTATTGATGGGGTTTGGCATGTGGACTCTCCCACCA
TCTCCCAGATGGTTACTTCTGAGGGCAATTCAAGGTAAAGGACCATTGCAGGAATACAAAGAGAATGCTATTGGAGCATTGAGCAAACTGAGAGGCCGCC
CTGCTGGCGATAAAGTATCTGAAAAACAAATAGAAGATACTATTATATCATTGAAAACTGCCTACACAGATGAAGAAGCTGAAGGAAATTTTCTCGAGGT
ATTGCAAGGACCAAGTTTGAAAGCATTTACAATTGGAGGAGGTTTGGTCCTATTTCAACAGATAACTGGACAGCCAAGCGTTCTGTATTATGCTGGTTCA
ATTCTTCAGAGTGCTGGTTTTTCTGCGGCTGCAGATGCTGCTCGAGTTTCAGTCGTTATTGGTATATTTAAGGTAAGTTGAGTAACTGGAACCAGGAAAA
GTCTTTTATCTCTCGTTCAAGAATATTAACCTGAGTCGCCCCCAAGGCCTAGCTCAAGTGGCAAAAGGTGGAGGATTTGTGGCTTAGGTCGCAGGTTCAA
GCCCCACACCATGCAAAGCGAAGCCCGGCATT