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Detailed information on CNT0016120


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P36397|ARF1_ARATH, E-value = 5e-22

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0006288, E-value = 6e-06 (V. vinifera)
CNT0034911, E-value = 1e-06 (P. patens)
CNT0018900, E-value = 4e-07 (Z. mays)
CNT0024009, E-value = 1e-06 (A. trichopoda)
CNT0027296, E-value = 3e-17 (O. sativa)

Expression of CNT0016120

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MINPSFFNACWTKIKIQLPHTFTYQSSLRQHILLNQEVT*

>peptide 2 (66 aa)
MKEMGPFNLITKCFLCRCLKLSSLYGFTTGNRRLVPAVRQCDFHLPLGSREIKSVCRKKERSQEYC*

>peptide 3 (58 aa)
MVGIVVTISPSLSLYNMVVLPAASRPTIRIRISFLANSRLKSFPNDKPIFFQCLLDQN*

>peptide 4 (31 aa)
MFLYSTVSTLNPDKERVIADNIKRNSLHQYK*

>peptide 5 (51 aa)
MKKASIRRSNQYNKNTRNQRKMKTLSNSQIQKAKIQISNSTNFSIKKEIHT*

>peptide 6 (33 aa)
MEERDLTVMKKESQRERERERGGSRSRKTLPFV*

>peptide 7 (46 aa)
MIGQWMFWGWHMTVPLFLSEVCNGVMKPAHLRTSKDVLYSHGYLRV*

Sequence

>CNT0016120
GTCCTGACCCCCGACATCCCAGACAGTGAAGCTTATGTTCTTGTATTCAACAGTCTCCACATTGAATCCTGATAAAGAAAGAGTTATTGCAGATAACATT
AAGAGAAATAGCTTGCATCAGTACAAATAAGACAAACGTGTCAGCAGAACAACCATGCTTCTAGAAACAGAGGACATAATTGTGGTGTGCATAGCTCATA
GCTGTTTGCAGCAGTATTTGGATCTAGACTATTAAATATATATTGAAACAGAACATCAGACATCTTGAAGGGTTCCTTATATCTTACTACATGCTGAAGA
TGGAAGTTTGGCATGCTCTGAATTATCAACAAATATTCGGGACGTCTCTTAAATATATAGTTTGCTGAAGAAAATGACCAATGAAGGAAATGGGACCCTT
TAACCTTATAACCAAGTGTTTTCTATGTCGCTGTTTGAAGTTAAGCTCTCTTTACGGTTTTACAACTGGTAATAGAAGGTTAGTCCCTGCAGTAAGACAG
TGTGATTTTCATTTGCCACTAGGTTCTAGAGAGATTAAGTCAGTCTGCAGAAAGAAGGAGCGCTCGCAAGAATATTGCTGAAGATTCAGTTAGATTTGTT
TTTTTGTGGGGTCATAGTTGATATCTTCTGTTTAAAGTAATAAATTTTGCTGACAAGAAGATAGTTTTGATTATTGACTTGTCTAGTTTGGTGGTTAAAC
CAATGTGTTCAACAAGCTCTACTACTATATAGTATTCCATTGGAGGTTATTGCAAAGAAACTCTGTAATACTATGATCGGGCAATGGATGTTTTGGGGAT
GGCACATGACTGTTCCATTATTCTTATCAGAAGTGTGTAATGGAGTGATGAAGCCTGCTCACTTGCGAACTTCTAAGGATGTTTTGTATTCACATGGATA
CTTAAGGGTGTAGCTTAAATTGTGGGTTTAATATAGAGATGTTTAGGCAGAAACTCACGACAGTGTTCCGATCATAATGATATATTAGTTCTGCAAGCAA
TAAAACATCTATAGTACACACAACATAAATTACCAATGGTAGGAATAGTGGTAACAATCTCTCCCAGCTTGAGCTTGTACAATATGGTGGTTTTACCAGC
TGCATCAAGACCCACCATCAGAATACGCATCTCCTTCTTGGCAAACAGCCGACTGAAAAGCTTCCCGAATGATAAACCCATCTTTTTTCAATGCCTGTTG
GACCAAAATTAAGATTCAATTACCACACACATTCACCTATCAATCAAGCTTAAGACAACATATTTTATTGAATCAAGAGGTTACATAAATGCACAATACA
AAATTATGATCTTAAGCCAACATAAAAATCCAAATTATGGCGTGGTACTCCTCTTAACATACTGATCTAAGCCTTCATTTTCAATACATTTGATGTATCA
AAAAAGCAACTGTTGGATCTTTATCAAAAGATTTCATCATAAATTTCAATAATCCTTTATTCATCGAGAGATCTAGTAGCAACAAGTTTAACAATTAAAA
GAATCAAGAACCCCTCTACTTAGAACGGATCTTGGGCAATGACAATCCGGATCCATTTATCAAAAAGAAGAAGCACCCAAATCAAGATCCAAAAAGAAGA
AGAACCCAGATGAAGAAAGCAAGCATACGGAGATCAAATCAATACAATAAAAATACAAGAAATCAAAGAAAGATGAAAACTTTATCAAATTCCCAGATCC
AAAAAGCCAAAATCCAGATCTCCAATTCAACAAACTTTTCAATCAAGAAAGAGATACATACATAAACTTTGTCAAATCAATTGTTATGAACCGAACGACG
CGTATGTGACAGATATGTAATACAAAGGAAATGGAGGAGAGAGATCTTACGGTGATGAAGAAGGAATCACAGAGAGAGAGAGAGAGAGAGAGAGGGGGCA
GTAGATCTAGAAAAACACTGCCCTTTGTATAATTGACAAGAAATGGGCAACTTTGGAAGTTCTCTTCTTGTTTTAGCGAAAGCCTCACGTATTTTAATGT
CACAATTTTGAATTTTCAAATATT