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Detailed information on CNT0002087


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|F4I4W2|HCS2_ARATH, E-value = 3e-26

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0023848, E-value = 3e-08 (A. trichopoda)

Expression of CNT0002087

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MTIICVSSTLMVIALTFSKDWSEGNSSEQDSLTHLTRGNNNSYALCI*

>peptide 2 (66 aa)
MLTTSGQRVVVQEKNEDKVIEHVVTIQGLTSSGYLLAVGDDNHMCELHPDGNSFDFFKGLVRRKLQ*

Sequence

>CNT0002087
CTTGAATTATACGACACATTGACATGTGCTCCAAATATCACAAAGAATGTGAGCTAAAGGCTGCTTGTTGGCATGGGTAAAGTTGAAGGAGAAGTTAGGG
ATCATGATTGAGGTTGCAAAATTGAAATATGTTAACAACAAGTGGACAGAGAGTTGTTGTACAGGAGAAGAATGAGGACAAAGTGATCGAACATGTGGTA
ACTATTCAGGGGTTGACATCCTCGGGATATTTGCTGGCTGTCGGTGATGACAATCATATGTGTGAGCTCCACCCTGATGGTAATAGCTTTGACTTTTTCA
AAGGACTGGTCAGAAGGAAACTCCAGTGAACAAGATTCCTTGACACATCTCACAAGAGGCAACAACAACTCTTACGCACTTTGTATATAATACGCAGGCT
TTGGCTTCAGAGCTAAGAATTTTCCAATAAATATAAGCTTTTGGCTTCAGTGCTAAGAACTTTCCAATAAACATCATATTTGTTAAATACATTTTGTCAT
TAGAAATTTCAGGGCTTTTGTATTCCATTTGTGAATTTCCGTCAAACTTGCAATCCCTTTCCTTGTCCGGTCAAACAAGATCTTCTATACATCATGGCAC
TTAAAAAACATCATGCAGTTGCAACCAAAATAATTACGGATTTTTTTCCTCTTGATTGGACCTAGTTCATGATTGCTTTACTCAATCATTTGTAAGGAGT
ATTGTGGTCCTTCTTAGCCAGCTATGAAATGATTTGAAAAGAAAAAAAAAAGTTTCTATGATTCATTGTTTTGCTCAATAA