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Detailed information on CNT0022943


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0007384, E-value = 4e-10 (V. vinifera)
CNT0042615, E-value = 6e-09 (A. thaliana)
CNT0035188, E-value = 1e-09 (P. patens)
CNT0019015, E-value = 4e-10 (Z. mays)
CNT0002871, E-value = 1e-09 (G. max)
CNT0029639, E-value = 4e-10 (O. sativa)
CNT0008755, E-value = 4e-10 (S. tuberosum)
CNT0038248, E-value = 1e-09 (S. moellendorffii)

Expression of CNT0022943

ERR364329: 4.045 RPKM

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MREREREREREGWFSVLKEAQFQYAFSLLC*

Sequence

>CNT0022943
ATACGCCTTTTAAAGTTGGATTTTTGACATTGGCCTTCCACGATCACTTGACTTCTTTTAGATACACACTGAACCAATTTACCCTTTAGGGCTTCTCTCA
CATCTGAGTTTTTTCCCTCAATAAAAGCCCTACATCTTTCATGGAGATAAGGAACCCTCCTTTTGTTTAGGGCTTCTGCTTACCTCACGTTTTAGTTTTC
ATGACCTTTTTAACTCAATACATGCCTTCTTTTCAAGGCACTCCCCAATACTCTCTCTATATTTGAATTGTAATGAGAAGTTGCGTGTACCCCTCAAGCA
ATAAGTGGGTCAGGATCCCTGTTTCAGACATTCTGAAAGTGTAACCCAGTTTTAGATAATAAAAAAGCTCGAGTTTTCATTCAAATTTCATCCAGAATTT
ATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGTTGGTTCTCAGTGCTCAAAGAAGCGCAATTCCAGTATGCATTCTCTCTGCTTTGTTGAGTACCAA
GCAAC