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Detailed information on CNT0023895


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0004924, E-value = 7e-06 (V. vinifera)
CNT0002847, E-value = 6e-22 (G. max)

Expression of CNT0023895

ERR364329: 25.988 RPKM

Peptides detected in this lncRNA

>peptide 1 (35 aa)
VSLFIIKVKKFEGPYYSPLSQTPSICLSKSLISLL*

>peptide 2 (37 aa)
MLLLHARVLESEMVYEVYMKLRSRSLALENVAVEILL*

>peptide 3 (46 aa)
MHPPLTLHKHPMCAEKALKRKANFEESKKLKERLRASKFENEEKVE*

>peptide 4 (32 aa)
MASCICSQNIMIKNLIKSKILLLFSVYHRRNL*

>peptide 5 (51 aa)
MKKRWSNTILPSGPSLENTATNHVKSKNTNSCECCCCMPGYLKVKWFTKYI*

Sequence

>CNT0023895
GTTTCCCTTTTCATCATAAAAGTGAAGAAATTCGAAGGCCCCTATTATAGTCCTCTCTCTCAAACCCCCTCCATTTGTCTCTCTAAATCTCTTATCTCCC
TTTTGTAACTCCAAAACCAGCGTGCGTCTCCGAAACTCCGAAGAAGGCCAAGAGAAAGATAAGAAGCCTGAATTAACTGTGGTGATGCATCCTCCTCTAA
CCTTACACAAGCACCCAATGTGTGCTGAAAAAGCTCTGAAGCGAAAAGCCAACTTTGAAGAGAGCAAGAAACTGAAGGAAAGGCTCCGAGCCTCTAAATT
CGAAAATGAAGAAAAGGTGGAGTAACACTATCCTACCAAGTGGTCCATCTCTTGAAAACACCGCCACAAACCATGTAAAATCTAAAAATACCAATTCATG
TGAATGTTGCTGCTGCATGCCCGGGTACTTGAAAGTGAAATGGTTTACGAAGTATATATGAAGCTTAGGAGTCGGAGTTTGGCCTTAGAAAATGTTGCAG
TTGAAATTCTTTTATAGAGCTCACCAGTTAGTGAGATGGCATCATGCATTTGTTCGCAAAATATTATGATAAAGAATTTGATTAAAAGCAAAATTCTTTT
GCTTTTTTCTGTCTACCACAGACGAAACTTGTAATGGAGAATGAAACTTCAAGCTTTATCCTTTTAGAAGAAAACCAAAAGAGAAC