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Detailed information on CNT0024131


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0004985, E-value = 4e-16 (V. vinifera)
CNT0042889, E-value = 4e-19 (A. thaliana)
CNT0034678, E-value = 1e-16 (P. patens)
CNT0019000, E-value = 4e-07 (Z. mays)
CNT0002061, E-value = 2e-08 (G. max)
CNT0031800, E-value = 2e-18 (O. sativa)
CNT0012080, E-value = 9e-08 (S. tuberosum)
CNT0038582, E-value = 6e-15 (S. moellendorffii)

Expression of CNT0024131

ERR364329: 4.915 RPKM

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MEVPIVSIVHSTPYYMTACCMPASGNSQLRTIWCCSCNRILFIMW*

>peptide 2 (83 aa)
SLSLSLSLSLSLSLSLGSSYLKIRMFSFVKVLNSTGSQLQRVQKRLAILNKKTKGGCSCMCLMLSVIAIVVLAVVVWALIKCL*

Sequence

>CNT0024131
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGGAAGTTCTTATTTGAAGATCAGAATGTTTAGTTTTGTCAAAGTTCTAAATT
CGACGGGCTCTCAATTGCAGAGGGTGCAGAAGAGATTGGCCATCCTGAATAAGAAAACAAAGGGAGGTTGCTCCTGCATGTGCTTGATGTTATCTGTCAT
TGCCATTGTGGTTCTGGCTGTTGTTGTCTGGGCCCTTATCAAGTGCTTGTAATGACAAGGACACCGGTTTTCATCTCAACTTGCTGTCATGGAAGTTCCA
ATTGTATCTATAGTCCATAGTACTCCATACTATATGACAGCTTGTTGCATGCCAGCTTCCGGAAATTCTCAATTGAGAACCATTTGGTGTTGCTCGTGTA
ATCGAATCTTGTTCATAATGTGGTGAGATTTGCTGTTGAGTTTGACTTGTGTGCAATTGTCATCTGTAAGCTATTATGCATTACTTGTTGTGGATTGGAG
CTTGGTGATTCTCGCTGAATGCAGACAAG