Detailed information on CNT0032062


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0021107, E-value = 3e-06 (Z. mays)
CNT0023953, E-value = 3e-06 (A. trichopoda)

Expression of CNT0032062

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MYTELTNNYRQYIHFIHSSIVIVIINMLNASNSYVYFDHMHVLTCTDFILVRAN*

>peptide 2 (90 aa)
MQEDYQRIRCNQEWCSDQAASFEARRGPLPPFCKLLSLSLSLSHPSCLHFFHLKALMLLLLLVLQNPEVSIVVVKKKFLSLMFSSLCLGC*

>peptide 3 (29 aa)
MQHSQNVSENSENVFSVAMTPNVMEQQKR*

>peptide 4 (38 aa)
MTEFLPESLSLSQCISTSNVSCCLLPFVLPLHPVSPAH*

>peptide 5 (29 aa)
MHQHLQCQLLFTAFCLAITSCVPCTLRCV*

>peptide 6 (36 aa)
MRNLTMQVNSGSHVVFRGQERTTFILSRCQLAKDGD*

>peptide 7 (65 aa)
MENGGEEDDRASRCKRITRESDATKNGAATKLQALRLVEDLSLPSVSSSLSLSLSLIHHVSIFSI*

>peptide 8 (58 aa)
MMVGNVYILPITVHYKILYLQGNIQNKKAISTLLIEFIYFLKQSLYRKFLHKIHRFTV*

>peptide 9 (49 aa)
MRKTRRESLQTGRRNRLLRAMTAPGRWPGFYDATVHSNYYYLVHTIVYI*

>peptide 10 (38 aa)
MRAYSCTYIYIKKRSILTYVLCISSQIRHMWHNTFYLT*

>peptide 11 (32 aa)
MEGKKMTEQADARGLPENQMQPRMVQRPSCKL*

>peptide 12 (34 aa)
MELKTAGAGGGDERQHGLFALPTAGHKGCLQDER*

>peptide 13 (33 aa)
SHCHAATNLIVSLVRLMEFTFHLMHLILYSGQV*

>peptide 14 (45 aa)
MHKYYIIIYVQCARINYISISCRHVVFMHASHRSRDRNLKLYVCP*

>peptide 15 (64 aa)
MVDFGKKEVTVRGTMVHTKKKRKQHKKKHEENKKGIAANWEKKSSSQSNDSARTLAWFLRCYSS*

>peptide 16 (58 aa)
MVQASTEVHKEVGQAYATFAKCFRKFRECFQRRNDAKCNGTTEALTNCIRAIRLGDRD*

>peptide 17 (91 aa)
MLECTILRVHCLLYSLLGPSETLNDPNPTQHYPNQSQWMDVVFSQANDDAKYLFDQYNQRPTRLENRIHVGYYASQETLFSLPSDASKVVA*

>peptide 18 (33 aa)
MSANMGCSHCRQRVTKVVSKMNGENLITLVKVL*

>peptide 19 (44 aa)
MSAVVYCLLSCHYILCPLHIEMCVMSDDHSLSPRILGPYFSVTF*

>peptide 20 (61 aa)
MSPFFPSKSSNASSASSSTKPRSLYRCGEKKVFKFDVLLPLLRMLIVPLGAQTSRLLAVIF*

Sequence

>CNT0032062
TCCCATTGTCATGCTGCCACTAATCTGATTGTGTCACTTGTGCGATTGATGGAGTTCACCTTCCATCTTATGCACCTAATCTTATATTCAGGACAAGTAT
AAAAAGCGAAGCTTTTCTCAACTCCCATTCAGACAAGAGAGAAGCTCCACTCTTCTCCACCCCAAGAGAATTGAAGCCAAGCATGGAGAATGGAGGGGAA
GAAGATGACAGAGCAAGCCGATGCAAGAGGATTACCAGAGAATCAGATGCAACCAAGAATGGTGCAGCGACCAAGCTGCAAGCTTTGAGGCTCGTCGAGG
ACCTCTCCCTCCCTTCTGTAAGCTCCTCTCTCTCTCTCTCTCTCTCTCTCATCCATCATGTCTCCATTTTTTCCATCTAAAAGCTCTAATGCTTCTTCTG
CTTCTAGTTCTACAAAACCCAGAAGTCTCTATCGTTGTGGTGAAAAAAAAGTTTTTAAGTTTGATGTTCTCCTCCCTTTGCTTAGGATGTTAATTGTTCC
ATTAGGTGCACAGACCAGTAGATTACTAGCAGTAATTTTCTGAATCAGTCGATTCTTTTCCAGAACCCCATTGTTCTTCTCCCTCCCTGGTGCATGCATG
CATAGCAATAGGCAATGACAGAATTCCTACCAGAATCTCTTTCCCTTTCTCAATGCATCAGCACCTCCAATGTCAGCTGTTGTTTACTGCCTTTTGTCTT
GCCATTACATCCTGTGTCCCCTGCACATTGAGATGTGTGTGATGAGTGACGACCATAGTTTATCTCCTCGGATACTGGGCCCCTATTTCTCAGTCACTTT
TTAGTACCTCTCAACTTTCAGGCTTTTAGCCTAAAGGTTAAAAAGGGACTATCAATCAACCAAACAATTGCACTGCAGTAGCTACAGAGTTTTCTTCTAG
CTAGGAGCAGGAACAAAACTGCTGAGATCAGAATGATCTCATTAACCCCTCAAAAAAAAAAGAATGATCTCATTAATTAAATCCATTTTCTAATTAACTA
TCTACATCTAAATGGCTGTCTCTTGGTAATGGGATGCAGTGCAAAACAAAGCCTGAATTTTTCTGAGTTTTTTTGACCAAGTACCTGGCAGTCACGTGGT
CTCCTATCCTCACAAGGGATGGAGCCGTTTACTCTAGAAAAAGAATCATAAAGAAATATTTAGAACAAAGAATAACTTCTACCTGTTGTTTTTCACCTTC
TCTTTCGACCGTCCGATCAGAATCCATCGATTGTAGCATCCATTGGCATAGCAAAAATACTTAGTCTGTCTTTCTTCATGCGTGCGTACAGCTGTACTTA
TATTTACATTAAGAAAAGATCTATTCTCACATACGTACTCTGTATCTCTAGTCAAATTCGGCACATGTGGCACAATACGTTTTATTTGACCTAGAGTACA
TGTATACGGAATTAACTAATAATTATAGGCAATACATCCATTTCATCCATTCATCCATCGTTATCGTAATAATTAACATGCTAAATGCCAGTAACAGCTA
CGTATATTTTGACCACATGCACGTGCTGACGTGCACGGATTTTATACTGGTCCGTGCAAATTAGTGACCGTTTCATAGCTAAGCCAGAGTGTACAGCTCT
GACCAATCTTTATCTATACGTGTATTAGTTCCTGCATTTTTACTATTTCTTTTTACAGTAGAGAAGTTCACATTTCCAACCTCATGTATTTTACTACTTA
TATAGGTAGAATACTGGAATTGCTTGGCATGGATGTCGTACACCCTTAGATTACAGCTAAGAAGAAATATATTAGTAAGATTCCCATCGGATTAGTAAAT
AAATTAATTACTTGCTGCCTCGACTAGCTATCTATGGATGTCAATGATTTTGGCCACCCGACCATAGGGTATGAGAGGCCACATGCTGTTGCCCACCATG
CAGGTAATTAAGCCTGCAGACTGATGATCACAACGGTAGAGTAGGGACTACACGTGATGCACAAGTACTACATAATAATCTATGTGCAATGTGCTCGGAT
TAATTATATTAGCATATCATGTAGGCATGTAGTATTTATGCATGCATCCCATAGAAGCAGGGACAGAAATTTAAAACTGTATGTATGCCCATAGCAAACT
GAACAAGAACAGATGAGGAATTTAACAATGCAGGTCAATAGTGGCTCTCATGTGGTTTTTAGAGGACAGGAGAGGACCACCTTCATATTGTCAAGGTGCC
AATTAGCGAAAGATGGAGATTAATGGTTAAGTGAGAGTGAGACCACACATGTATCCATTGGCAACACGTAGTCGCTCTAACTAGTCTTTTAATTAGTGAG
TCTCATCAACAGTGATAGTGTAAGACCAGCCTAACCCACTAATAAAGTAGTGGTATAATTTAATTAATTAGTAGATCAATAAGTGGTTATACATAGCTGA
TTATTGCAGAGTGGTCCCTTAATTAACTTCCTGATTACTTAGAAGCAATGCAAATACAGAAGATGATAATGAAGAATTGATGGTATTTATGGAGGCTGCT
AGTGGGATTAATTGTGTGAAATGGAACTGAAAACTGCAGGTGCAGGTGGTGGTGATGAGCGCCAACATGGGCTGTTCGCACTGCCGACAGCGGGTCACAA
AGGTTGTCTCCAAGATGAACGGTGAGAATCTAATAACCCTTGTGAAAGTTCTATGAGATCGACAAGAGAGCATCGATGGGTCACATCAAATCTGAAGACC
CGATAAATACATCACATACATAGCTTCAGTCCTGAGAACTCGTTAAGTTTAAGGTTAAATTGCACCGACAGAAACATGCATGGAGATACAGAGATATCAT
GTTTGAACTGTTTGTGAATAGCATGCTGATCACTGCTAGTGTTACTGTCAGTTAATTACTGCATCTGTTGTTGATATTTTCCATCTGTTTGATTAATTAG
CAGGGTTGCTAGATTACATGGTGGATTTTGGGAAGAAGGAGGTGACAGTGAGAGGGACGATGGTGCACACCAAGAAGAAGAGGAAGCAACACAAGAAGAA
GCATGAGGAAAACAAGAAGGGAATCGCTGCAAACTGGGAGAAGAAATCGTCTTCTCAGAGCAATGACAGCGCCAGGACGCTGGCCTGGTTTCTACGATGC
TACAGTTCATAGCAACTACTACTATCTAGTGCATACTATAGTCTACATATAGTGTTACTTATATACTACTAATATATATAGATATATCTAGAAGCTATAT
AGCTGCTCGATTAATTGTTTATTTTTCTCTTTAGTTTCTTCTTGCAATTTCTTTCTTTCTCATGTTTTATTATTTTTCTTTTTGATTGAAAATAACGTAT
GATGGTAGGAAATGTGTATATTCTGCCCATAACTGTGCATTATAAAATCCTCTATTTGCAAGGTAACATACAAAACAAGAAAGCTATTAGCACGTTATTA
ATTGAGTTTATCTATTTTTTAAAGCAATCTCTATATAGAAAGTTTTTGCACAAAATACATCGTTTTACAGTTTAAAAGACGTTTTAACGGAAATCAAGAT
AAAATTGTATCTTAATCGAAAAAGAACATGCTAGAGTGTACAATATTGAGGGTTCATTGCTTACTTTATTCTTTGCTAGGACCATCTGAAACTCTGAACG
ACCCCAACCCAACCCAACACTACCCAAACCAAAGCCAGTGGATGGATGTCGTTTTCAGCCAAGCTAACGATGATGCAAAGTACTTATTCGATCAGTATAA
CCAACGCCCAACACGCCTAGAGAATCGGATCCATGTAGGGTACTACGCCAGCCAGGAGACACTTTTCTCGCTGCCATCAGATGCATCCAAAGTTGTAGCC
TAGAGGTGGTATTGCAAGGATAACAAAGTTAATTACATGTTCACCTAAAAAATGTTAATTTGGACCTAATACAACCAGATATATAGTTAATGGTACAAGC
TAGTACTGAAGTACACAAAGAGGTTGGTCAGGCATATGCAACATTCGCAAAATGTTTCAGAAAATTCAGAGAATGTTTTCAGCGTCGCAATGACGCCAAA
TGTAATGGAACAACAGAAGCGTTAACGAACTGCATCCGTGCAATACGCTTGGGGGACAGGGATTAGTGGCGACTGAATATTCGCCTTCACATGCTGTGCT
TGATGATAGACACTTTATGTTTTTACCTGGGTTTATAGTACACTCACTCTGATCACAAACAGGGCAAAATGTTCAGAGCTATGCTCCCTTGAAAGTGCAG
GTTTCACATCAAAGAACACATGTGATGTGATGGAAGGCTTGTACATGTATTGGAGGTGCAATGAGTGAACTCAGCTACGAGTGAAAGTTCACATTCAGAT
TGATGCCTTCCATGCTGTAATTGATTATACTGGTTTCAAGAATAGAAGACAACTAGAATAGTACATATGATAAATTTTGGTGTTTTCAGGTGTTTTAGTG
TAGCTTTGGAAAATGTTCTTGAGGTGCTTGTAAGATGG