SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 9692 records in
Solanum tuberosum

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0016698 S. tuberosum 1:2395166-2395419 (+) noncoding (-1.09525)- 56 0 splicing regulationConfident lncRNA
CNT0016697 S. tuberosum 1:33332785-33335520 (-) noncoding (-0.155439)4e-39 (sp|Q9FXA3|BH095_ARATH) 158 0.624 Confident lncRNA
CNT0016696 S. tuberosum 1:2959786-2961210 (-) noncoding (-1.04416)- 41 0 Confident lncRNA
CNT0016695 S. tuberosum 1:2364386-2364909 (+) noncoding (-1.19621)- 32 12.359 Confident lncRNA
CNT0016694 S. tuberosum 1:81046856-81075008 (-) noncoding (-1.12427)- 43 0.263 Confident lncRNA
CNT0016693 S. tuberosum 1:1170050-1172461 (-) coding (4.55063)4e-95 (sp|Q6L400|R1B16_SOLDE) 677 3.782 Low-confidence lncRNA
CNT0016692 S. tuberosum 1:61134805-61144099 (-) noncoding (-0.275302)1e-61 (sp|Q944H2|AB12I_ARATH) 245 13.759 Low-confidence lncRNA
CNT0016691 S. tuberosum 1:74186947-74187196 (+) noncoding (-1.09936)- 37 0 Confident lncRNA
CNT0016690 S. tuberosum 1:77736394-77739938 (-) coding (0.363719)2e-145 (sp|Q9M9W9|P2C34_ARATH) 187 28.262 Low-confidence lncRNA
CNT0016689 S. tuberosum 1:75450467-75454575 (-) noncoding (-1.10992)- 58 41.021 Confident lncRNA
CNT0016688 S. tuberosum 1:75322314-75322637 (-) noncoding (-1.11194)- 53 0 Confident lncRNA
CNT0016687 S. tuberosum 1:77004626-77004983 (+) coding (0.387937)9e-29 (sp|P38416|LOXB_SOLLC) 38 3.939 Confident lncRNA
CNT0016686 S. tuberosum 1:67941725-67942207 (-) noncoding (-0.991888)- 42 0 Confident lncRNA
CNT0016685 S. tuberosum 1:78833050-78842549 (+) coding (3.53556)7e-148 (sp|Q39978|VTSS1_HYOMU) 220 35.09 Low-confidence lncRNA
CNT0016684 S. tuberosum 1:1343170-1372343 (+) noncoding (-0.173936)6e-34 (sp|Q9C9H7|RLP12_ARATH) 274 0 Low-confidence lncRNA
CNT0016683 S. tuberosum 1:87223132-87228418 (+) noncoding (-0.112664)2e-147 (sp|Q8GWX2|NIPA6_ARATH) 332 7.567 Low-confidence lncRNA
CNT0016682 S. tuberosum 1:65785444-65789987 (+) noncoding (-0.550843)- 169 9.715 Confident lncRNA
CNT0016681 S. tuberosum 1:46242901-46352197 (-) noncoding (-1.03541)- 73 21.744 Confident lncRNA
CNT0016680 S. tuberosum 1:3402310-3406536 (-) noncoding (-1.0352)7e-18 (sp|Q564K3|CND2_ARATH) 107 2.222 Confident lncRNA
CNT0016679 S. tuberosum 1:88021261-88025608 (-) noncoding (-0.669138)- 127 0.542 Confident lncRNA
CNT0016678 S. tuberosum 1:81644337-81646094 (+) noncoding (-1.19477)- 42 22.027 Confident lncRNA
CNT0016677 S. tuberosum 1:81760518-81765028 (+) noncoding (-0.422524)2e-36 (sp|P85107|TGS1_RAT) 126 4.118 Confident lncRNA
CNT0016676 S. tuberosum 1:1323325-1362158 (-) noncoding (-1.31314)4e-93 (sp|Q9C9H7|RLP12_ARATH) 91 0 splicing regulation, miRNA-associatedConfident lncRNA
CNT0016675 S. tuberosum 1:16940548-16942813 (-) noncoding (-1.34665)3e-51 (sp|P32087|RR16_SOLTU) 79 17.353 Confident lncRNA
CNT0016674 S. tuberosum 1:458745-617680 (-) coding (1.03701)4e-75 (sp|Q9FKC8|MT799_ARATH) 350 6.584 Low-confidence lncRNA
CNT0016673 S. tuberosum 1:27486075-27486490 (+) noncoding (-1.07088)- 33 0 Confident lncRNA
CNT0016672 S. tuberosum 1:66759029-66759590 (-) noncoding (-0.974589)- 46 0.719 Confident lncRNA
CNT0016671 S. tuberosum 1:13153893-13165423 (-) noncoding (-1.08576)1e-79 (sp|Q9FLF0|RS92_ARATH) 34 0.978 Confident lncRNA
CNT0016670 S. tuberosum 1:64764531-64768705 (-) noncoding (-1.02899)- 49 123.521 Confident lncRNA
CNT0016669 S. tuberosum 1:13153930-13165454 (-) noncoding (-1.09866)1e-68 (sp|Q9FLF0|RS92_ARATH) 34 16.479 Confident lncRNA
CNT0016668 S. tuberosum 1:77449641-77462156 (-) noncoding (-1.20976)- 40 1.362 Confident lncRNA
CNT0016667 S. tuberosum 1:13125229-13165423 (-) noncoding (-1.09168)4e-81 (sp|Q9FLF0|RS92_ARATH) 34 0.933 Confident lncRNA
CNT0016666 S. tuberosum 1:8498003-8504199 (-) noncoding (-0.415376)- 145 17.148 Confident lncRNA
CNT0016665 S. tuberosum 1:13126755-13127331 (-) noncoding (-1.01077)2e-20 (sp|P49214|RS9_TOBAC) - 30.286 Confident lncRNA
CNT0016664 S. tuberosum 1:8493818-8504406 (-) noncoding (-0.538949)- 145 13.408 Confident lncRNA
CNT0016663 S. tuberosum 1:8498003-8504339 (-) noncoding (-0.430984)- 145 16.163 Confident lncRNA
CNT0016662 S. tuberosum 1:5767383-5767865 (+) coding (0.00529374)- 129 0 Confident lncRNA
CNT0016661 S. tuberosum 1:13125229-13125687 (-) noncoding (-0.977388)2e-79 (sp|Q9FLF0|RS92_ARATH) 53 0.425 Confident lncRNA
CNT0016660 S. tuberosum 1:8671362-8673838 (-) noncoding (-1.07095)- 58 38.238 Confident lncRNA
CNT0016659 S. tuberosum 1:13125229-13165423 (-) noncoding (-1.09168)4e-81 (sp|Q9FLF0|RS92_ARATH) 34 0.933 Confident lncRNA
CNT0016658 S. tuberosum 1:74363672-74367305 (+) noncoding (-1.06423)- 46 2.909 Confident lncRNA
CNT0016657 S. tuberosum 1:74377572-74378599 (+) noncoding (-1.13702)5e-25 (sp|Q93VM9|THOC1_ARATH) 53 0 Confident lncRNA
CNT0016656 S. tuberosum 1:78841357-78893070 (+) noncoding (-0.709623)1e-22 (sp|Q9XJ32|VTSS1_SOLTU) 54 63.315 Confident lncRNA
CNT0016655 S. tuberosum 1:71306177-71308276 (-) noncoding (-0.805015)0.000000000000003 (sp|B3H7G2|URM12_ARATH) 73 85.362 Confident lncRNA
CNT0016654 S. tuberosum 1:1202284-1219736 (+) noncoding (-0.75418)0.000004 (sp|Q8BKC5|IPO5_MOUSE) 88 0.221 Confident lncRNA
CNT0016653 S. tuberosum 1:1203587-1241856 (+) coding (0.125892)2e-31 (sp|O00410|IPO5_HUMAN) 205 4.412 Confident lncRNA
CNT0016652 S. tuberosum 1:1203587-1241856 (+) noncoding (-0.459067)0.0000000005 (sp|Q8BKC5|IPO5_MOUSE) 205 2.035 Confident lncRNA
CNT0016651 S. tuberosum 1:57729369-57730058 (+) noncoding (-1.18712)- 38 14.611 Confident lncRNA
CNT0016650 S. tuberosum 1:57765380-57767781 (+) noncoding (-1.09338)- 55 0 splicing regulationConfident lncRNA
CNT0016649 S. tuberosum 1:59257749-59258127 (-) noncoding (-1.2437)- 30 0 Confident lncRNA