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lncRNA id
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Found 4761 records in
Arabidopsis thaliana

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
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Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0045075 A. thaliana 1:30329024-30330225 (+) noncoding (-1.18742)6e-36 (sp|Q93VG8|PPDEX_ARATH) 82 0.256 splicing regulationConfident lncRNA
CNT0045074 A. thaliana 1:29484139-29487003 (+) noncoding (-1.08403)3e-65 (sp|Q8L7C9|GSTUK_ARATH) 147 5.989 miRNA-associatedConfident lncRNA
CNT0045073 A. thaliana 1:29479510-29480182 (+) noncoding (-1.32001)- - 1.967 Confident lncRNA
CNT0045072 A. thaliana 1:29464502-29464873 (+) noncoding (-1.11978)3e-26 (sp|Q9M9F0|VQ9_ARATH) - 0.433 Confident lncRNA
CNT0045071 A. thaliana 1:16823438-16823822 (+) noncoding (-1.14452)0.000000009 (sp|Q94LA4|HEM22_ARATH) 35 0 Confident lncRNA
CNT0045070 A. thaliana 1:10084642-10088538 (+) noncoding (-1.32184)0.00000000001 (sp|Q3E6Y3|Y1869_ARATH) 49 0.956 splicing regulationConfident lncRNA
CNT0045069 A. thaliana 1:16846735-16847325 (+) noncoding (-1.17715)0.000000000000004 (sp|P0C2F6|RNHX1_ARATH) 75 1.804 Confident lncRNA
CNT0045068 A. thaliana 1:30363093-30363402 (-) noncoding (-1.44918)- - 0.606 Confident lncRNA
CNT0045067 A. thaliana 1:7016648-7016935 (-) noncoding (-1.05682)- 36 153.614 Confident lncRNA
CNT0045066 A. thaliana 1:20470025-20470247 (+) noncoding (-1.35847)- - 2.859 Confident lncRNA
CNT0045065 A. thaliana 1:26724925-26725233 (-) noncoding (-1.23433)1e-29 (sp|Q941R6|MLP31_ARATH) 38 9.248 Confident lncRNA
CNT0045064 A. thaliana 1:3379459-3379775 (-) noncoding (-1.21781)2e-18 (sp|Q9C6I8|NOG1_ARATH) 63 24.899 Confident lncRNA
CNT0045063 A. thaliana 1:3418861-3419080 (+) noncoding (-1.12471)- - 21.6 Confident lncRNA
CNT0045062 A. thaliana 1:3397639-3397975 (+) noncoding (-1.38733)- - 35.893 splicing regulationConfident lncRNA
CNT0045061 A. thaliana 1:3398316-3398537 (+) noncoding (-1.16757)- - 4.281 Confident lncRNA
CNT0045060 A. thaliana 1:23685288-23685517 (-) noncoding (-1.13197)- - 4.7 Confident lncRNA
CNT0045059 A. thaliana 1:23688964-23689443 (-) noncoding (-0.949664)- 67 1.8 Confident lncRNA
CNT0045058 A. thaliana 1:26702495-26705037 (-) noncoding (-1.07396)0.000000000000003 (sp|Q8L7A4|AGD11_ARATH) 81 1.141 Confident lncRNA
CNT0045057 A. thaliana 1:12033887-12034755 (-) noncoding (-1.12041)0.000000000008 (sp|Q9LQE8|ARFN_ARATH) 57 0 Confident lncRNA
CNT0045056 A. thaliana 1:16122934-16123248 (+) noncoding (-1.05054)- 35 0.864 Confident lncRNA
CNT0045055 A. thaliana 1:12018713-12018922 (-) noncoding (-1.17705)- 52 0 Confident lncRNA
CNT0045054 A. thaliana 1:21902987-21903224 (-) noncoding (-1.00841)1e-27 (sp|Q9LQ54|DRL12_ARATH) 63 19.436 Confident lncRNA
CNT0045053 A. thaliana 1:13828269-13828477 (-) noncoding (-1.15651)0.000000001 (sp|P04146|COPIA_DROME) 54 0.25 Confident lncRNA
CNT0045052 A. thaliana 1:13824802-13825075 (-) noncoding (-1.17066)0.0000000007 (sp|Q9LQM1|FBD39_ARATH) 56 0 Confident lncRNA
CNT0045051 A. thaliana 1:28734129-28734907 (-) noncoding (-1.02509)5e-38 (sp|Q700C2|SPL16_ARATH) 52 29.391 Confident lncRNA
CNT0045050 A. thaliana 1:5555638-5556202 (+) noncoding (-0.977369)1e-54 (sp|Q9SA23|SYP51_ARATH) 57 2.341 splicing regulationConfident lncRNA
CNT0045049 A. thaliana 1:608250-609428 (+) noncoding (-1.07056)8e-51 (sp|Q9SRX2|RL191_ARATH) 81 1.333 splicing regulationConfident lncRNA
CNT0045048 A. thaliana 1:5547454-5547698 (+) noncoding (-1.48858)- - 909.373 Confident lncRNA
CNT0045047 A. thaliana 1:18252033-18252408 (-) noncoding (-0.961809)- 95 0 Confident lncRNA
CNT0045046 A. thaliana 1:15778352-15779505 (+) noncoding (-1.21087)- 67 0 Confident lncRNA
CNT0045045 A. thaliana 1:18454902-18456605 (-) noncoding (-1.13723)0.00000000009 (sp|Q9WTV7|RNF12_MOUSE) 171 0 Confident lncRNA
CNT0045044 A. thaliana 1:10817238-10818152 (+) noncoding (-1.23724)- 31 1.465 splicing regulationConfident lncRNA
CNT0045043 A. thaliana 1:29759832-29760057 (-) noncoding (-1.17495)8e-17 (sp|F4IDI6|BRG2_ARATH) 45 32.495 Confident lncRNA
CNT0045042 A. thaliana 1:29764089-29764663 (-) noncoding (-1.22935)- 35 0.449 Confident lncRNA
CNT0045041 A. thaliana 1:21795400-21832023 (-) noncoding (-0.869327)- 76 7.396 Confident lncRNA
CNT0045040 A. thaliana 1:21107988-21110752 (+) noncoding (-0.762427)2e-41 (sp|Q38858|CALR2_ARATH) 75 0.354 Confident lncRNA
CNT0045039 A. thaliana 1:21090636-21090865 (+) noncoding (-1.10488)4e-20 (sp|O04151|CALR1_ARATH) 44 8.293 splicing regulationConfident lncRNA
CNT0045038 A. thaliana 1:21092161-21092715 (+) noncoding (-1.23565)0.0000000009 (sp|O04151|CALR1_ARATH) 73 15.003 splicing regulationConfident lncRNA
CNT0045037 A. thaliana 1:6542872-6543247 (+) noncoding (-0.920701)- 112 0 Confident lncRNA
CNT0045036 A. thaliana 1:18154045-18154459 (+) noncoding (-1.26188)4e-28 (sp|Q9FIH4|FB280_ARATH) 86 2.569 Confident lncRNA
CNT0045035 A. thaliana 1:12099096-12099378 (-) noncoding (-1.10514)- - 0 Confident lncRNA
CNT0045034 A. thaliana 1:1973173-1973452 (-) noncoding (-1.18438)0.000000000000002 (sp|Q8H184|PT106_ARATH) 36 2.277 Confident lncRNA
CNT0045033 A. thaliana 1:5767161-5767996 (-) noncoding (-1.22022)- 49 71.31 Confident lncRNA
CNT0045032 A. thaliana 1:12990113-12990867 (+) noncoding (-1.08669)3e-16 (sp|P04146|COPIA_DROME) 111 0 Confident lncRNA
CNT0045031 A. thaliana 1:12980903-12981356 (+) noncoding (-1.09695)0.00000000000007 (sp|Q6R8G2|PHO18_ARATH) 44 0.923 Confident lncRNA
CNT0045030 A. thaliana 1:18504685-18506059 (+) noncoding (-0.599437)- 75 46.006 Confident lncRNA
CNT0045029 A. thaliana 1:6508738-6509014 (-) noncoding (-1.15667)- 36 3.849 Confident lncRNA
CNT0045028 A. thaliana 1:3951373-3951630 (-) noncoding (-1.03158)- 52 0 Confident lncRNA
CNT0045027 A. thaliana 1:25048283-25049277 (+) noncoding (-1.29582)8e-52 (sp|P10795|RBS1A_ARATH) 42 27.789 splicing regulationConfident lncRNA
CNT0045026 A. thaliana 1:25119270-25120032 (+) noncoding (-0.989445)- 84 84.912 Confident lncRNA