SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 8594 records in
Oryza sativa

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0032616 O. sativa 1:30954085-30954298 (+) noncoding (-1.24862)3e-21 (sp|F4IB81|LYK3_ARATH) 29 0 Confident lncRNA
CNT0032615 O. sativa 1:35603671-35604038 (+) noncoding (-0.802254)0.0000000000002 (sp|Q5N9J9|PHYK2_ORYSJ) 110 0 splicing regulationConfident lncRNA
CNT0032614 O. sativa 1:31672925-31676152 (+) noncoding (-0.932846)- 110 0.136 Confident lncRNA
CNT0032613 O. sativa 1:35574344-35574718 (+) noncoding (-1.17295)- 58 4.147 Confident lncRNA
CNT0032612 O. sativa 1:738283-741818 (-) noncoding (-1.25946)0.00000000001 (sp|P43298|TMK1_ARATH) 79 8.363 Confident lncRNA
CNT0032611 O. sativa 1:40909578-40914191 (-) noncoding (-1.15632)0.0000000000007 (sp|Q9XGY5|TIM13_ORYSJ) 119 5.024 Confident lncRNA
CNT0032610 O. sativa 1:35745526-35749623 (-) noncoding (-1.22363)- 99 2.268 Confident lncRNA
CNT0032609 O. sativa 1:35763593-35765119 (-) noncoding (-0.315848)2e-87 (sp|P46297|RS23_FRAAN) 90 192.93 Low-confidence lncRNA
CNT0032608 O. sativa 1:6555237-6555798 (+) noncoding (-1.07996)- 89 2.118 Confident lncRNA
CNT0032607 O. sativa 1:37584884-37588115 (-) noncoding (-0.254988)5e-117 (sp|Q9C8C1|LCV2_ARATH) 205 43.336 Low-confidence lncRNA
CNT0032606 O. sativa 1:39540767-39541066 (+) noncoding (-1.06775)- 53 1.955 splicing regulationConfident lncRNA
CNT0032605 O. sativa 1:7234488-7236633 (-) noncoding (-1.11432)- 145 5.447 Confident lncRNA
CNT0032604 O. sativa 1:7201185-7203096 (-) noncoding (-1.23635)0.00000000003 (sp|Q9ZVX1|UBC23_ARATH) 131 3.503 splicing regulationConfident lncRNA
CNT0032603 O. sativa 1:7201185-7203096 (-) noncoding (-1.13067)0.00000000004 (sp|Q9ZVX1|UBC23_ARATH) 131 2.382 splicing regulationConfident lncRNA
CNT0032602 O. sativa 1:37618903-37622156 (+) noncoding (-1.0195)2e-50 (sp|Q9SB58|ZDH19_ARATH) 73 0.667 splicing regulationConfident lncRNA
CNT0032601 O. sativa 1:20952455-20953537 (+) noncoding (-0.975707)- 84 0 Confident lncRNA
CNT0032600 O. sativa 1:42826162-42826782 (+) noncoding (-1.20643)- 61 0.552 splicing regulationConfident lncRNA
CNT0032599 O. sativa 1:25122486-25127466 (+) noncoding (-0.832574)- 59 1.691 Confident lncRNA
CNT0032598 O. sativa 1:31418548-31419080 (+) noncoding (-1.03113)- 84 66.991 Confident lncRNA
CNT0032597 O. sativa 1:31412872-31413094 (+) noncoding (-1.30999)- 37 0 splicing regulation, miRNA-associatedConfident lncRNA
CNT0032596 O. sativa 1:25919273-25920455 (+) noncoding (-1.02475)5e-42 (sp|Q5VP69|MPK16_ORYSJ) 43 0.484 splicing regulationConfident lncRNA
CNT0032595 O. sativa 1:5263393-5265884 (-) noncoding (-0.817856)- 138 5.775 Confident lncRNA
CNT0032594 O. sativa 1:42448946-42449672 (+) noncoding (-1.18393)0.0000000003 (sp|Q946Y7|SYP61_ARATH) 34 0.89 splicing regulationConfident lncRNA
CNT0032593 O. sativa 1:839879-842743 (+) noncoding (-1.16375)7e-81 (sp|D7SFH9|GPDL2_ARATH) 71 0 splicing regulationConfident lncRNA
CNT0032592 O. sativa 1:23205058-23205594 (-) noncoding (-1.23481)- 36 0 Confident lncRNA
CNT0032591 O. sativa 1:8892558-8900134 (+) coding (0.108455)- 389 6.988 Confident lncRNA
CNT0032590 O. sativa 1:8892530-8900134 (+) coding (0.240345)- 417 7.203 Confident lncRNA
CNT0032589 O. sativa 1:37841287-37844156 (-) noncoding (-0.731781)0.000001 (sp|Q1G3Y0|RIC9_ARATH) 80 2.889 Confident lncRNA
CNT0032588 O. sativa 1:42553462-42553750 (+) noncoding (-1.20267)8e-18 (sp|Q5D869|NRPE1_ARATH) 52 0 Confident lncRNA
CNT0032587 O. sativa 1:38282146-38282720 (+) noncoding (-1.11718)- 38 0 Confident lncRNA
CNT0032586 O. sativa 1:38275550-38277485 (+) noncoding (-1.13187)3e-44 (sp|Q9LPL4|SKP2A_ARATH) 77 1.844 splicing regulationConfident lncRNA
CNT0032585 O. sativa 1:26913460-26919617 (+) noncoding (-0.937404)- 132 2.583 splicing regulationConfident lncRNA
CNT0032584 O. sativa 1:33670759-33674489 (-) noncoding (-1.10603)2e-32 (sp|Q9MAP7|SBT35_ARATH) 84 2.619 Confident lncRNA
CNT0032583 O. sativa 1:9166312-9166839 (-) noncoding (-1.17308)3e-38 (sp|Q9LT08|PSDE_ARATH) 78 9.398 splicing regulationConfident lncRNA
CNT0032582 O. sativa 1:9173009-9175943 (-) noncoding (-0.774972)2e-117 (sp|B4FF80|CNR5_MAIZE) 270 10.841 Low-confidence lncRNA
CNT0032581 O. sativa 1:32912570-32913717 (+) noncoding (-1.23223)- 39 0.397 splicing regulationConfident lncRNA
CNT0032580 O. sativa 1:32934209-32934997 (+) noncoding (-1.03265)- 67 15.437 Confident lncRNA
CNT0032579 O. sativa 1:20700553-20703095 (+) noncoding (-0.717993)- 128 7.935 Confident lncRNA
CNT0032578 O. sativa 1:38958022-38958438 (-) noncoding (-1.25904)9e-77 (sp|B2ZX90|FAS1_ORYSJ) 29 0 Confident lncRNA
CNT0032577 O. sativa 1:38033373-38034790 (-) noncoding (-1.26021)- 83 0 splicing regulationConfident lncRNA
CNT0032576 O. sativa 1:34883015-34884432 (-) noncoding (-0.939275)- 112 0.534 Confident lncRNA
CNT0032575 O. sativa 1:7645505-7645855 (+) noncoding (-1.41781)- 97 3.391 Confident lncRNA
CNT0032574 O. sativa 1:6973598-6973837 (+) noncoding (-1.37924)- 29 0 Confident lncRNA
CNT0032573 O. sativa 1:36395917-36397667 (-) noncoding (-0.9963)2e-176 (sp|Q941T9|GMPP2_ORYSJ) 64 0.177 splicing regulationConfident lncRNA
CNT0032572 O. sativa 1:35370219-35370620 (-) noncoding (-1.01223)- 107 0 Confident lncRNA
CNT0032571 O. sativa 1:21201971-21203280 (+) noncoding (-1.18231)- 45 2.056 Confident lncRNA
CNT0032570 O. sativa 1:33506149-33545679 (+) noncoding (-1.43299)0.00000000004 (sp|P93276|M030_ARATH) 45 0 Confident lncRNA
CNT0032569 O. sativa 1:33506194-33545679 (+) noncoding (-1.32732)0.0000000005 (sp|P93276|M030_ARATH) 45 0 Confident lncRNA
CNT0032568 O. sativa 1:42452830-42454252 (-) noncoding (-1.23586)- 43 0 Confident lncRNA
CNT0032567 O. sativa 1:11665735-11666894 (-) noncoding (-1.35558)0.00000000007 (sp|Q7XFU9|Y1030_ORYSJ) 52 1.332 splicing regulationConfident lncRNA