SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 2569 records in
Amborella trichopoda

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0021672 A. trichopoda AmTr_v1.0_scaffold00890:1758-4141 (-) noncoding (-1.41758)- 95 2.259 Confident lncRNA
CNT0021671 A. trichopoda AmTr_v1.0_scaffold00906:5-811 (-) noncoding (-0.495316)- 57 1.794 Confident lncRNA
CNT0021670 A. trichopoda AmTr_v1.0_scaffold00925:1251-2192 (-) noncoding (-1.0162)- 71 0.86 Confident lncRNA
CNT0021669 A. trichopoda AmTr_v1.0_scaffold00939:1362-2231 (-) noncoding (-1.3186)- 29 1350.08 Confident lncRNA
CNT0021668 A. trichopoda AmTr_v1.0_scaffold00961:892-2052 (-) coding (1.51478)7e-34 (sp|Q0WWT7|STR11_ARATH) 102 2.861 Low-confidence lncRNA
CNT0021667 A. trichopoda AmTr_v1.0_scaffold00965:5935-6197 (+) noncoding (-0.860961)- 62 0 Confident lncRNA
CNT0021666 A. trichopoda AmTr_v1.0_scaffold00970:761-2627 (+) noncoding (-0.936473)- 83 2.948 Confident lncRNA
CNT0021665 A. trichopoda AmTr_v1.0_scaffold00983:444-5549 (-) noncoding (-1.23998)- 31 3.082 Confident lncRNA
CNT0021664 A. trichopoda AmTr_v1.0_scaffold01088:1643-2412 (+) noncoding (-0.0175363)9e-22 (sp|Q9SWS1|ACFR2_ARATH) 66 26.808 Confident lncRNA
CNT0021663 A. trichopoda AmTr_v1.0_scaffold01176:480-1647 (+) noncoding (-1.25673)5e-29 (sp|P0DI70|CSPL2_GINBI) 74 18.219 Low-confidence lncRNA
CNT0021662 A. trichopoda AmTr_v1.0_scaffold01206:502-2648 (-) noncoding (-0.839822)7e-20 (sp|Q8GWB7|GUX6_ARATH) 95 14.343 Confident lncRNA
CNT0021661 A. trichopoda AmTr_v1.0_scaffold01265:2051-2902 (+) noncoding (-0.162798)0.0000000000001 (sp|O64556|Y2923_ARATH) 129 0.827 Confident lncRNA
CNT0021660 A. trichopoda AmTr_v1.0_scaffold01369:5-4337 (-) noncoding (-0.483126)- 103 3.811 Confident lncRNA
CNT0021659 A. trichopoda AmTr_v1.0_scaffold01409:589-1379 (+) noncoding (-1.09011)- 54 6.687 Confident lncRNA
CNT0021658 A. trichopoda AmTr_v1.0_scaffold01409:589-1379 (+) noncoding (-1.08552)- 54 6.996 Confident lncRNA
CNT0021657 A. trichopoda AmTr_v1.0_scaffold01475:954-4487 (-) noncoding (-0.910037)- 108 11.746 Confident lncRNA
CNT0021656 A. trichopoda AmTr_v1.0_scaffold01475:954-4487 (-) noncoding (-0.905389)- 96 14.23 Confident lncRNA
CNT0021655 A. trichopoda AmTr_v1.0_scaffold01506:4261-4653 (-) noncoding (-1.09974)- 37 5.198 Confident lncRNA
CNT0021654 A. trichopoda AmTr_v1.0_scaffold02664:3322-4116 (-) noncoding (-1.07656)- 39 7.475 Confident lncRNA
CNT0021653 A. trichopoda AmTr_v1.0_scaffold01549:855-4575 (-) noncoding (-1.1123)- 79 0 Confident lncRNA
CNT0021652 A. trichopoda AmTr_v1.0_scaffold01648:1095-2652 (-) noncoding (-0.60826)- 90 10.765 Confident lncRNA
CNT0021651 A. trichopoda AmTr_v1.0_scaffold02901:271-722 (+) coding (0.0267698)7e-20 (sp|B9DFR3|PAE9_ARATH) 67 1.83 Confident lncRNA
CNT0021650 A. trichopoda AmTr_v1.0_scaffold01728:1552-2790 (+) noncoding (-1.2226)- 104 38.07 Confident lncRNA
CNT0021649 A. trichopoda AmTr_v1.0_scaffold02242:2559-3735 (-) noncoding (-1.27019)5e-29 (sp|P0DI70|CSPL2_GINBI) 70 15.818 Confident lncRNA
CNT0021648 A. trichopoda AmTr_v1.0_scaffold01839:160-4153 (-) noncoding (-0.344055)- 123 165.104 Confident lncRNA
CNT0021647 A. trichopoda AmTr_v1.0_scaffold01845:3348-3891 (-) noncoding (-1.35499)- 40 25.747 Confident lncRNA
CNT0021646 A. trichopoda AmTr_v1.0_scaffold03453:885-1392 (-) noncoding (-0.819076)- 54 9.237 Confident lncRNA
CNT0021645 A. trichopoda AmTr_v1.0_scaffold04457:1-651 (+) noncoding (-1.12889)- 58 609.314 Confident lncRNA
CNT0021644 A. trichopoda AmTr_v1.0_scaffold02067:503-814 (-) noncoding (-0.935289)- 32 4.166 Confident lncRNA
CNT0021643 A. trichopoda AmTr_v1.0_scaffold02171:1-3773 (-) noncoding (-1.12873)4e-43 (sp|Q70Y15|RR16_AMBTC) 49 166.932 Confident lncRNA
CNT0021642 A. trichopoda AmTr_v1.0_scaffold02353:656-3333 (-) noncoding (-1.03624)0.0000000000003 (sp|Q55909|Y305_SYNY3) 86 8.604 Confident lncRNA
CNT0021641 A. trichopoda AmTr_v1.0_scaffold02401:2930-3541 (-) noncoding (-1.09497)- 44 2.081 Confident lncRNA
CNT0021640 A. trichopoda AmTr_v1.0_scaffold02419:1349-2315 (-) coding (0.814903)1e-23 (sp|Q8VYW6|GAGT1_ARATH) 107 3.439 Low-confidence lncRNA
CNT0021639 A. trichopoda AmTr_v1.0_scaffold02486:2224-2859 (+) noncoding (-0.921924)- 58 17.824 Confident lncRNA
CNT0021638 A. trichopoda AmTr_v1.0_scaffold02486:2224-2859 (+) noncoding (-0.92547)- 58 12.271 Confident lncRNA
CNT0021637 A. trichopoda AmTr_v1.0_scaffold02716:26-1146 (+) noncoding (-0.823148)- 74 1.639 Confident lncRNA
CNT0021636 A. trichopoda AmTr_v1.0_scaffold02810:184-3072 (+) noncoding (-0.830439)- 92 7.289 Confident lncRNA
CNT0021635 A. trichopoda AmTr_v1.0_scaffold02857:2287-2804 (-) noncoding (-0.620538)- 86 6.095 Confident lncRNA
CNT0021634 A. trichopoda AmTr_v1.0_scaffold02929:22-2988 (-) noncoding (-1.0482)- 58 9.397 Confident lncRNA
CNT0021633 A. trichopoda AmTr_v1.0_scaffold03036:917-3019 (-) coding (0.470293)3e-31 (sp|Q9LM02|SMT1_ARATH) 37 3.112 Confident lncRNA
CNT0021632 A. trichopoda AmTr_v1.0_scaffold03044:12-1901 (-) noncoding (-0.588719)- 108 1.807 Confident lncRNA
CNT0021631 A. trichopoda AmTr_v1.0_scaffold03050:9-1979 (+) coding (0.756618)6e-32 (sp|Q9FEE2|TON2_ARATH) 83 24.611 Confident lncRNA
CNT0021630 A. trichopoda AmTr_v1.0_scaffold03164:119-1132 (+) noncoding (-0.88589)- 69 1.437 Confident lncRNA
CNT0021629 A. trichopoda AmTr_v1.0_scaffold03191:1-1184 (-) noncoding (-0.844632)0.00000000006 (sp|Q8W4Y8|IBB_LENCU) 110 1315.58 Confident lncRNA
CNT0021628 A. trichopoda AmTr_v1.0_scaffold03208:2073-2786 (+) noncoding (-0.310928)0.0000000000002 (sp|O64556|Y2923_ARATH) 126 0 Confident lncRNA
CNT0021627 A. trichopoda AmTr_v1.0_scaffold03234:362-1038 (+) noncoding (-1.30212)0.0000008 (sp|Q84WL9|AP2S_ARATH) 53 3.648 Confident lncRNA
CNT0021626 A. trichopoda AmTr_v1.0_scaffold03319:577-1601 (+) noncoding (-0.730707)- 98 13.721 Confident lncRNA
CNT0021625 A. trichopoda AmTr_v1.0_scaffold03430:192-2230 (+) noncoding (-0.270909)0.000000000001 (sp|Q9M812|CUT1C_ARATH) 53 32.468 Confident lncRNA
CNT0021624 A. trichopoda AmTr_v1.0_scaffold03606:3-433 (-) noncoding (-1.13373)- 41 5.532 Confident lncRNA
CNT0021623 A. trichopoda AmTr_v1.0_scaffold03663:1521-2632 (+) coding (0.0734904)6e-27 (sp|Q94AX4|DLD_ARATH) 55 40.623 Confident lncRNA