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ENST00000503429 (lncRNA) and ENST00000500779: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000503429 vs ENST00000500779)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000500779 STARD4 antisense RNA 1 antisense ENST00000503429 1612 609 noncoding Cis

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000503429 (lncRNA)Expression for ENST00000500779



Is lncRNA (ENST00000503429) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000134986 down 0.0014553917306 1.46555 . YES


Is the interacting transcript (ENST00000500779) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000246859 - >0.05 - - -

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000503429 (lncRNA)All interactions for ENST00000500779