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ENST00000596342 (lncRNA) and ENST00000544440: detailed information for the interacting components



Function(s) assigned to this lncRNA-RNA interaction (ENST00000596342 vs ENST00000544440)

Number of records: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000544440 MYC binding protein 2, E3 ubiquitin protein ligase protein coding ENST00000596342 2176 789 CDS Cis

Expression


NOTE: Expression values are provided at the transcript level. Differential expressio analysis was performed at the gene level.


Expression for ENST00000596342 (lncRNA)Expression for ENST00000544440



Is lncRNA (ENST00000596342) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000236051 up 0.00000000464718748353 1.76636 YES YES


Is the interacting transcript (ENST00000544440) differentially expressed?
Gene id Direction Adjusted p-value Fold change EBSeq confirmed? edgeR confirmed?
ENSG00000005810 up 0.0000000000137329927331 1.51433 YES YES

NOTE: the differential expression results were calculated for KTCN vs non-KTCN samples.
The KTCN samples: KC_15, KC_16, KC_17, KC_18, KC_19, KC_20, KC_21, KC_22, KC_23, KC_25, KC_26, KC_28, KC_30, KC_31, KC_32, KC_34, KC_55
The non-KTCN samples: KR_08, KR_13, KR_14, KR_15, KR_18, KR_19, KR_21, KR_23, KR_24, KR_25, KR_26, KR_27, KR_28, KR_33, KR_35, KR_48, KR_52


Other interactions


All interactions for ENST00000596342 (lncRNA)All interactions for ENST00000544440