Detailed information on ENST00000382375

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000620139 melanoregulin protein coding ENST00000382375 514 270 UTR3 Trans

Sequence

>ENST00000620139 (2452 nt)
GAGATGAGAAGAAAGAGTAGGCTCTGTTGTCCCTCAGACGGCGCTGCTGCAGTGCGTCTTCGCACTTACGCGGAGCGGTAATGTGAGGAAGCCTCCCGCC
AAACAGATGAGGGAGGAGGAGGAGGGGAGAGGCCAGAGAGAGAAGCGGCTTTCGGGAAGGAAAGTGTGATCTAGTAGGTGGAATAGTCCTCTCCAAACTT
TGACCTGAGAATGACCCTCTATTTGGATTTGGATTACACAAAGTTTAACGTTTTTTGGAAAAATCCTACCTAGGTAATGTGTAGTTCTCAATGCATCATG
TCAGGCAGCTTATGATGCCAATTTGTCCCATGGCCTTAAATTCCACAACCTCATCATCTACCACCTTTGGTGCTTTCAGAATCATGACTCTCAATGTTGA
AGAATGGGCTACTGCATGGAAGGTGCTGATCCTTTTAGAGGCAGCCGTGGAAGAGGAAAAGAGATCAGAAGAGAAAAGGATATTGGTTTGCGGAACATGT
GGGACAAGAAGTTCCCAGAAGAATTTGTGAGCAACTTCCCGACAGTAAGGCCCTGGCTAGACCTCAGGATGGTCCCTGCCTCCTGGACATTAGGAAGCCC
AAAGGCCAGAACAAAAACACATGCCTAGTGGGGGAAGGCTCACTAAGAGGGCACCAAGTGGGGCAAATACCCCTGGTAACCCATTTATGGAGGCTGCCAC
AGAAATGCTAGTTGGAAATTTTCCTCCTTCAGTCTATCATGAATTTCTTTTTTCTCTTTTGAGATGAAGTCGCCCGGGCTGCAGTTCAGTGGTGCAATCT
CAGCTCACTGCAAGCTCTGCCTCCCAGGTTCCAACGATTGTCTTGTCTCAGCCTCCTGAGTAGCTGAGATTATAAGCACGCACCATCATACCCGACTAAT
TTTTGTATTTATAGTAGAAATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTTAGGGTGATCCACCCATCTTGGCCTCCAAAAGTGC
TGGGATTACAGGCATGAGCCACTGCACTCGGCTGTACCGTGATTATTAGTTCAAGGTTCTCTTTCACTGGGGTAAAGACCTTAAGAGAGCAGTTTTTGGG
CTTTATATTCTCAATTTCCCGCACAGTGCCTAGCACATAGCAAGGACTCAACAAATTTCATTGAATGAATGAAAAAACATAGTTTACCAAATGTCAGTGT
ACTCAAACTCTTTTAACTGCTAGCTATAGAAATCCAATTAAGACTCACTTGGGTAAAAAAAAATAAAAAAATAAACAAAATAAACTGCTCACTTATTTGA
AAAATTAAGGAAGGATTTCAGGCATGGCTTGATCCAGCTACTCAAAAAAGGTTGTCAGAAATGTCTGTCCGTTCTTCATTTATTCTTTCTCATTTGTGGG
CTTTGTTCCCAGATAAGATCACTCCTTCTGGGGACAAGATGGTCACTAGTAGATCCAGGTTTACTTTCTATCAGCTGAGCAACCTCTCAAGAAAAAATAA
ATAAATAAATAAACCTCTCTTTAAATAGCACCAGGCTGCTGGGTGTGGTGGCTCATACCTGTAACCCCAGCACTTTGGGAGGCTGAGGTAGGAGGATTGT
GGGAAGCCAGGAGTTCAAGACCAGCCCAGCCAACATTGTGAGACATAATCTCTACAAATAAAATAAATTAGTTGGACATGATGGTGTGCACCTATAGTCC
CAGCTACTCGGGAGGCTGAAGCAGAAGGATCACTTGAGTCTGAGAATTCGGTGTTGTTTAAGCCACCCTGTTGTGGTATCTGCTATGGCTGCACAGGCAG
AAATAGGGACACAAGTGCAGGTTCAGGGCAAGGTGTGTGAGCACACTCAGTCCCTGGCCTCGGAGTCTCTCTGGATGGCTTCTTGCCTAGGGTGACTGAC
AGAGGGAGGGATGATATGCAAAGGCACCTGTTCTCCTCATGACCTAACCCCAATTCTTACTCCACGGGTTCATGACAGCCTATTCTGCTGGAGACTGTGT
CTTAAAACTTCCTCCCCTAGTTTCTCTCAAGTACCCCTCGTGAGCTGTGATTTCACTGGGCTTTGAACTCTTAGGCCATTTGAGGCTGCAGTGAGCTATG
ATTGTATCACTGCACTCCAGCCTAGATGACAGAACGAGACCCCATCTCTAATGAATAAATAAATATGGCTGGGCACAATGGCTCAGGCCTGTAATCCCAG
CATTTGGAAGACCAAGACAGGCAGATCGCTTCAGCTCAGGAGTTCGAGATCATTCTGGCCAACAAGGCGAAACCCTGTCTCTACCAAAAATACAAAAATT
AGCCAGGCAGGGTGGCATGTGCCTTTAATCCCAGCTACAGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTTCAGTGAGCTGAAAT
TGTGCCACTGCACTCCAGCCTGAGTGACAGAGTGAGACTTTGCAACCAAAAAA

Expression



Full and truncated open reading frames discovered in ENST00000620139

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.