Detailed information on ENST00000551203

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000494969 colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) protein coding ENST00000551203 538 294 CDS Trans

Sequence

>ENST00000494969 (1993 nt)
GAACTCTGGGATCAGTTTGACAACTTAGAAAATCGATAGTCTTGAGAAATTCATCATATCTGCCAAGGAAAGGACTGAGATTGAACTCAGCTATACAAAA
CAACTCAGGAATCTTTTAAAGACATGCCAACCTAAAAGGAACTGGAAGGAGAAAGAATACATTACGTAAAACTCTCCTTCCCTCCCTGTGAACAAAATGA
GTGATCACGCTAGGCAGCATTAAGTTATCTTCTTTGAGGTCTTGAACTTTCAGATCACCGTGGAGTTACAAGGGCATGTTCAAAACCAAAAGCAGGAGAG
GAAATCTCACTTTCATGATGCCCAGAAGGCACAACCACCGACAGAGACTTGATGGAAGCAACTTGAGGCAAGTAAAAGACAATTGAGATTATAAAAAGGC
TGCTGAGCACATCAGTATTTTGAGAAAATGCCATATGTTTTAAAAACACGTTTTTAAAAGTCGATGTTGAAAAAGGCACACCACCAAGCTGCGAAAACAT
CACCAATGGCAGAAGACGGCAGACTACTCAATGAGAATTGAATTACTCATCAATTCAAGAAATTTGACACTGAGCTGCAGGAATTTTACCATCCTAATAG
TTCCAACAACTTCCAGAAAATACAAGAGATAGAGGGAAAGAGGATAGTGAGAATGAGAGAATCAGTGAAGACATATGTAGCGATTGGGCAACAGGTGATA
GCAATCAATAGGAGATGCTTGGAGAGAATAGTAAAGGCAACTGAATCAATGATCAGAAAAATGTCACAGCTGGTAATAAAAACTTTCAAGTCAGAGTGTG
AGCCTCCTGGAGACATCTGAGGACTACACTCTGCCAATAAGGTGCTTGATAATAGTCTTTCAGATTTCTGAGGAGAAGGCAAACCAGGGTCAGCTGTGGT
GGCAAATTGAAAGGAAACTTCTGGCTGTTCATAAAAATGTATAAATAAAGCTCCAAAGCAGCAAAAGGAACTGATTGGTTTAATGAGCTCGTTATCAAAC
CCAATATTGGCTGCTTCAAAAGTCTATAATGTAGGCTGGGCACAGTGGTTCACACCAGTAATCATCCCAGCATATTGGGAGTCTGAGGCAGGTGGATCAG
TCGAGGTCAGGAGTTTCAGACCAGCCTGGACAACATGGTGAAACCCCATCTCTACCAAAAATACAAAAATTAACCAGATGTGGTGGTGCACACCTGTAAT
CCCAGCTACTTGGGAGGCTGAGATGGGAGAATCGCTTGGACCTGGGAGGTGGAGGTTGCAGTAAGCTGAGATCATGCCACTGCACTCCAACCTGGGTGAC
AGAGTGAGACTCCATCTCAAAGAAAAAAGTCTGTAGTGTAAGGGGTGTAACCCCAGAGGATGTTGGCAGTCTTCCACCTCAACTGAAAAGGAAAAAACTA
CAAGAGAAAGTCAATGAAATAAATACAGATGGAGATGGATCAAAGAAATGGCATAACAAAAATGAAAAACATGTACAAAAGAAATCTTCAAATGGGAGAT
ACAGCCAGTTTGAGTCACAAATTAACAAAATTCAGACAAAAATATAGAAAAACAAGAGGCCCAGAAATTTGAAGTCTAGCTGCCTGAGGTTGAAGGCAGG
CTCACACAATCAAGTGAACAGGCCTGACAACAGAGTGGAATGTACAAAAACCCAATCCAAAATCCCAGAGAGGTTTGCACAAGACTGGAAGGACTCAGAA
GGCAGTTACATAGAGGAGCCAGTCAAGAAAGTGGGGTGAGGAGTTCTGGTTGTGGATTTTGATAGTGAAATGATAATGAATTTGATAAGGAACTGCTTCC
TGCCTTAGGGACTTGGAAAACCCTCTACATGTTTGAAGTTCAGAATGAAGGAATCATTTCAATAGTTGAAGCAAAAATATTGTATATTATAGAGGAAAAT
GAAGGTGCTGCGTGAATCTGCTTTTGGAAAAATGAAGATGAAAAGAGTTAAGTCCCTACTTTGTCAACATTGATTTGGACTAAAATGCCAAAGG

Expression



Full and truncated open reading frames discovered in ENST00000494969

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.