Detailed information on ENST00000596342

lncRNA-RNA interactions

Number of interactions: 4

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000429715 MYC binding protein 2, E3 ubiquitin protein ligase protein coding ENST00000596342 2176 789 CDS Cis
ENST00000544440 MYC binding protein 2, E3 ubiquitin protein ligase protein coding ENST00000596342 2176 789 CDS Cis
TCONS_00067015 MYC binding protein 2, E3 ubiquitin protein ligase novel protein coding ENST00000596342 2176 789 UTR3 Cis
TCONS_00067018 MYC binding protein 2, E3 ubiquitin protein ligase novel protein coding ENST00000596342 2176 789 CDS Cis

Sequence

>TCONS_00067018 (833 nt)
CCCCTAAGAAGCCTTCTCTGACCACTCCAGGGCACAATGATCTCAAGGTTCAGCATCTCCAGAGATGAGCTTTCCAAATACCTGATGAAGATATGCATGT
GAGAAGGAATTAATGACAGGCATTAACACTATATTGGCCAGAGGACTCATTAGCTGATTCCGCAGGTTTTATAATATGCTACTCTTGCTAATATACACCA
CTATTTTTCTTAATTACAAATGCAACATGGAACTCAGGTGTTTAGGGCTATGAAAAGAAAAAATGGGCAACATTTATAGCCAGAAATTTCTGTAATAAGT
TTCACAAAATATTTTGTTACACTCTTAAAATATATTACATCAATTATCCTGTGCTAGAATATGTTGTAAGGACACTCACTTGAGACGTAATCAGTCTGAA
TACTCGCAGAGTCTCAGCTTCACAGTTCCTCTGCTGGGCCACACTGGCTGAAATCTGGCCAGCTATTTTTGTGCTTTCACCATCTTTCCAGCCCAGGACT
TTGACTTGTCGAACTCTCAGTGTATTTTCTGGGCCTTTTAATTCAATTTTTATGATGTGATTATCCCCTCCTGGAAGTTCACTTGTTACCCAGCCAATGT
GCCTGGAATCCAGATCAACCTGGTTGAGTAGAAAAGAGGCAGGAACCTGATTCAGCTGGATCACTTTTATCACTGTGCTGGACTTAGCATTGATACCAGC
AAGCTCAAATAACAAAGAATTGCACAGAGTAAAGGTTATGAGGTTATTTCACACTGATTTTCTTATTTCAACCAGGTGAAGATAAGTAATATTATTTATA
GTAGCTATTACACAGATGAAGAAACTAAGGTTAA

Expression



Full and truncated open reading frames discovered in TCONS_00067018

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.