Detailed information on ENST00000612252

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000345097 forkhead box N3 protein coding ENST00000612252 2326 832 UTR3 Trans
TCONS_00075813 forkhead box N3 novel protein coding ENST00000612252 2326 832 UTR3 Trans

Sequence

>TCONS_00075813 (831 nt)
TTCCTCCACATTTTCACCATGGCAGTATTAAGTAGTGAGTGTGAATGACACAGCATGAAACTGGTTACTGAATCAGCTATGAGCTCAGATGGCCTCAACA
TACATACTCAAGAAATGTTGCATGTTTAAATAACTGAGAGTGTGCTAAATCTCATCTAAAAAAAAGGAGGAGAGGGGCTGGGGAACTCAGGCCACAGTCA
TGAAAGGATGAATACAATTTCTAGGTTTAATAGGTTCACCATATCGAAGTCTTTGAGAATCCAATATGGAATATCAATTATTTTGCAAAAGGTAGAGAAA
GCAGTTCTCAACTTTTGCAAATGAAATACAGTGGAAAAACACTGTTGTATATATTCCAAATAAATAGTCTCGATTTCAATGCTAACAAAACAACAGGAAG
GGTACTCGTGAGCATCTCACGGTTAAGTCAGAAATGATCGTTCACACACGTCTGATTTCAGAAGTACAACAGCAAGGTGCAGCACCATAGACACATCGGT
TTCGGCTGTTAAAAGATGGATCGTTTTAAAAACTGTGTTTTCCTTCCTTAATTTTTGGTCAGTGAAGCTAGCACTTGTTTGCTGAACTGTGGAAGAACTG
CAAGGTCACACACATTATTCATGATAAAGCAACCGAGCTGACGAGTCTGTGCTTAATTCAAGAATAACCAGTAGGAGAGAGAGAAAACACAAGGAGTTAA
CCACCATCGCCGGTGCTCTCTCAAAGGAAGAGGGGTTAACAGATGAATTCACAAAGGTAGGCAGATCTATACAGAACACTGAATGCCATGTGTAAATCCT
CATGAAACTCCAGAAACAGGAACACCACACAA

Expression



Full and truncated open reading frames discovered in TCONS_00075813

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.