Detailed information on TCONS_00044256

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00116668 desmoglein 3 novel protein coding TCONS_00044256 552 258 UTR3 Trans

Sequence

>TCONS_00116668 (795 nt)
CAGGCTAGAGTGCAGTGGCACGACCTCTGCTCGCTGCAAGGTCTGCCTACTGGGTTGACGCCATTTCCTGCCTCGGCCTCTGGAGTAGCTGGGACTACAG
GTGCCCACCACCATGCCCAGCTAATTTTTTCTATTTTTTAGGAGAGACGGGGTTTCACCGTGTTAGTCAGGATGGTCTCGATCTCCTGACCTTGTGATCC
TCCCGCCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCCAGCCTATGTTCTGAAATAGTTGTATATGGGCTGGGTCACAGGGAAAG
TGAAACTCAGAGCTAATTTAAGGCTGGACACAGAGTCAGCAACACACAAGACATCATCTTGAAGGAAGGATGGCTTTGGCCAGACCAAGACCGAGACTTG
GAGACCTGATTGAGATTTCTCGCTTTGGCTATGCACACTGGGCCATCTACGTGGGAGATGGCTATGTGGTCCATCTGGCTCCGGCAAGTCACTGGTGCAG
TCACGACAGTAGGTGTGGCAGCAGGCCTGCTGGCTGCCGCAAGCCTTGTGGGGATCCTGCTGGCCAGAAGCAAGCGGGAAAGGCAATAAATCCAAGAAAT
TGTCCCAACAACCACCAATTCTTACGGAGGAATATTATTTAGCCAGCAGGAGTGGAGTTTGGTTTACTGATTTTACTGTTTTGTGTTCATGAATCTTTAT
TTTAATGGAGTTAAAAGCACAGGAAAATGTATTTGGAAATGCAGCTTAGTATGAATTCTATTAAAGACACAATTGGGCTCTGCTATGGACTGAATG

Expression



Full and truncated open reading frames discovered in TCONS_00116668

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.