Organism (latin name) All retrocopies ORF RNA-Seq EST ChIP-Seq TSS Lab. RDV
Human
(Homo sapiens)		 4611 847 678 199 223 799 51 193
Fugu rubripes
(Takifugu rubripes)		 43 36 0 1 0 0 0 0
Pacific transparent sea squirt
(Ciona savignyi)		 32 25 0 5 0 0 0 0
Rhesus macaque
(Macaca mulatta)		 2377 589 412 4 0 0 0 0
Lesser hedgehog tenrec
(Echinops telfairi)		 2138 401 0 0 0 0 0 0
Stickleback
(Gasterosteus aculeatus)		 22 15 0 0 0 0 0 0
Medaka
(Oryzias latipes)		 57 36 0 4 0 0 0 0
Platypus
(Ornithorhynchus anatinus)		 108 54 15 0 0 0 0 0
Opossum
(Monodelphis domestica)		 1858 503 120 1 0 0 0 0
Treeshrew
(Tupaia belangeri)		 4647 707 0 3 0 0 0 0
Hedgehog
(Erinaceus europaeus)		 695 170 242 0 0 0 0 0
Shrew
(Sorex araneus)		 758 190 0 0 0 0 0 0
Mouse Lemur
(Microcebus murinus)		 1613 460 0 0 0 0 0 0
Orangutan
(Pongo abelii)		 3708 556 286 0 0 0 0 0
Horse
(Equus caballus)		 1105 218 188 2 0 0 0 0
Tetraodon
(Tetraodon nigroviridis)		 30 25 0 0 0 0 0 0
Southern American pika
(Ochotona princeps)		 1217 247 0 0 0 0 0 0
Guinea Pig
(Cavia porcellus)		 1469 198 146 2 0 0 0 0
Sloth
(Choloepus hoffmanni)		 2687 465 0 0 0 0 0 0
Hyrax
(Procavia capensis)		 461 101 0 0 0 0 0 0
Dolphin
(Tursiops truncatus)		 1936 483 0 1 0 0 0 0
Tarsier
(Tarsius syrichta)		 2164 398 0 0 0 0 0 0
Kangaroo rat
(Dipodomys ordii)		 784 203 0 0 0 0 0 0
Alpaca
(Vicugna pacos)		 652 147 0 0 0 0 0 0
Megabat
(Pteropus vampyrus)		 1488 144 0 0 0 0 0 0
Armadillo
(Dasypus novemcinctus)		 2667 400 483 0 0 0 0 0
Zebrafinch
(Taeniopygia guttata)		 36 18 0 0 0 0 0 0
Wallaby
(Macropus eugenii)		 2151 372 0 3 0 0 0 0
Elephant
(Loxodonta africana)		 1199 200 0 0 0 0 0 0
Fruit fly
(Drosophila melanogaster)		 83 81 0 25 0 0 0 0
Rabbit
(Oryctolagus cuniculus)		 1849 519 289 3 0 0 0 0
Panda
(Ailuropoda melanoleuca)		 1852 236 0 0 0 0 0 0
Zebrafish
(Danio rerio)		 34 23 0 6 0 0 0 0
Anole lizard
(Anolis carolinensis)		 193 93 63 0 0 0 0 0
Turkey
(Meleagris gallopavo)		 18 12 0 2 0 0 0 0
Gibbon
(Nomascus leucogenys)		 3075 525 0 0 0 0 0 0
Xenopus
(Xenopus tropicalis)		 69 60 15 0 0 0 0 0
Marmoset
(Callithrix jacchus)		 3912 886 553 8 0 0 0 0
Microbat
(Myotis lucifugus)		 2529 628 0 0 0 0 0 0
Lamprey
(Petromyzon marinus)		 26 14 0 2 0 0 0 0
Tasmanian devil
(Sarcophilus harrisii)		 805 163 0 0 0 0 0 0
Cow
(Bos taurus)		 1784 561 365 48 0 0 0 0
Gorilla
(Gorilla gorilla)		 2910 513 375 0 0 0 0 0
Bushbaby
(Otolemur garnettii)		 3384 642 0 0 0 0 0 0
Chimpanzee
(Pan troglodytes)		 3285 680 456 11 0 0 0 0
Cod
(Gadus morhua)		 33 28 0 1 0 0 0 0
Vase tunicate
(Ciona intestinalis)		 32 29 0 9 0 0 0 0
Coelacanth
(Latimeria chalumnae)		 119 52 22 0 0 0 0 0
Tilapia
(Oreochromis niloticus)		 63 55 0 1 0 0 0 0
Squirrel
(Ictidomys tridecemlineatus)		 1842 344 0 0 0 0 0 0
Pig
(Sus scrofa)		 1181 196 133 23 0 0 0 0
Mouse
(Mus musculus)		 4148 1200 423 113 182 107 11 0
Dog
(Canis familiaris)		 2089 510 279 22 0 0 0 0
Chinese softshell turtle
(Pelodiscus sinensis)		 64 39 0 0 0 0 0 0
Platyfish
(Xiphophorus maculatus)		 25 22 0 0 0 0 0 0
Ferret
(Mustela putorius furo)		 1570 328 0 0 0 0 0 0
Cat
(Felis catus)		 1897 251 139 0 0 0 0 0
Rat
(Rattus norvegicus)		 2826 769 179 52 0 0 0 0
Chicken
(Gallus gallus)		 25 15 14 4 0 0 0 0
Caenorhabditis elegans 6 5 0 1 0 0 0 0
Duck
(Anas platyrhynchos)		 13 8 0 0 0 0 0 0
Flycatcher
(Ficedula albicollis)		 29 21 0 0 0 0 0 0

Organism (latin name) All retrocopies Retrocopies with conserved ORF
Tausch goatgrass
(Aegilops tauschii)		 62 56
Amborella
(Amborella trichopoda)		 44 17
Lyre-leaved rock-cress
(Arabidopsis lyrata)		 34 31
Mouse-ear cress
(Arabidopsis thaliana)		 27 22
Purple false brome
(Brachypodium distachyon)		 54 49
Brassica oleracea 60 42
Chinese cabbage
(Brassica rapa)		 46 41
Chlamydomonas reinhardtii 8 6
Soybean
(Glycine max)		 29 12
Barley
(Hordeum vulgare)		 96 83
Leersia perrieri 30 29
Barrel medic
(Medicago truncatula)		 65 51
Wild banana
(Musa acuminata)		 65 10
Oryza barthii 29 28
Oryza brachyantha 28 28
African rice
(Oryza glaberrima)		 69 53
Oryza glumaepatula 37 37
Rice subsp. indica
(Oryza sativa indica)		 80 78
Longstamen rice
(Oryza longistaminata)		 24 23
Oryza meridionalis 29 27
Indian wild rice
(Oryza nivara)		 39 38
Red rice
(Oryza punctata)		 46 44
Brownbeard rice
(Oryza rufipogon)		 46 46
Rice subsp. japonica
(Oryza sativa japonica)		 74 59
Ostreococcus lucimarinus 7 7
Moss
(Physcomitrella patens)		 32 21
Western balsam poplar
(Populus trichocarpa)		 30 20
Peach
(Prunus persica)		 60 58
Spikemoss
(Selaginella moellendorffii)		 18 10
Foxtail millet
(Setaria italica)		 48 45
Tomato
(Solanum lycopersicum)		 80 53
Potato
(Solanum tuberosum)		 130 76
Sorghum
(Sorghum bicolor)		 52 49
Cacao
(Theobroma cacao)		 38 31
Wheat
(Triticum aestivum)		 204 154
Grape
(Vitis vinifera)		 99 43
Maize
(Zea mays)		 56 38