Parental gene:

BECN1, ENSBTAG00000019914

Aliases:BECN1, ATG6
Description:Beclin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q4A1L4]
Organism:Cow (Bos taurus)
Coordinates:19:43479258..43489432(-)


>ENSBTAG00000019914
ATGGAGGGGTCTAAGACATCCAGCAGCACCATGCAGGTGAGCTTCGTGTGTCAGCGCTGCAGCCAGCCTCTGAAACTGGA
CACGAGCTTCAAGATTCTGGACCGTGTCACCATCCAGGAGCTCACAGCTCCATTACTTGCCACAGCCCAGCTGAAACCAG
GAGAGACCCAGGAGGAAGAGGCTAACTCAGGAGAGGAGCCATTTATTGAAACTCGCCAGGATGGTGTCTCTCGCAGATTC
ATCCCCCCAGCCAGGATGATGTCCACAGAAAGTGCCAACAGCTTCACTCTGATTGGGGAGGCATCTGATGGCGGCACCAT
GGAGAACCTCAGCCGAAGACTAAAGGTCACTGGGGACCTTTTTGACATCATGTCAGGCCAGACAGATGTGGATCACCCCC
TGTGTGAGGAATGCACAGACACTCTCCTAGACCAGCTGGACACTCAGCTCAACGTCACTGAAAATGAATGTCAGAACTAC
AAACGCTGTTTGGAGATCTTAGAGCAAATGAATGAAGATGACAGTGAACAGCTTGGGTTAGAGCTAAAGGAGCTGGCATT
AGAGGAGGAGAGGCTGATCCAAGAGCTGGAAGATGTGGAAAAGAACCGGAAGATAGTGGCGGAAAATCTCGAGAAGGTCC
AGGCTGAGGCTGAGAGGTTGGATCAGGAGGAAGCTCAGTATCAAAGGGAATACAGTGAATTTAAAAGACAACAGCTGGAA
CTGGATGATGAGCTGAAGAGTGTAGAAAACCAGATGCGTTATGCCCAGATGCAGCTGGACAAGCTGAAGAAAACCAACGT
CTTTAATGCAACCTTCCACATTTGGCATAGTGGACAGTTTGGTACAATCAATAACTTCAGACTGGGTCGGCTGCCCAGTG
TTCCTGTGGAATGGAATGAGATTAATGCTGCTTGGGGCCAGACAGTGTTGCTGCTCCACGCCCTGGCCAATAAGATGGGT
CTGAAATTTCAGAGGTATCGACTTGTTCCCTATGGAAACCATTCATATCTGGAGTCTCTGACAGACAAATCTAAGGAGCT
GCCGTTGTACTGTTCAGGGGGGCTTCGGTTTTTCTGGGACAACAAGTTTGACCATGCAATGGTGGCTTTCCTGGACTGTG
TGCAGCAGTTCAAAGAAGAAGTTGAGAAAGGCGAGACACGTTTTTGCCTTCCTTACAGGATGGATGTGGAGAAAGGCAAA
ATTGAAGACACAGGAGGCAGTGGTGGTTCCTATTCCATCAAAACTCAGTTTAACTCGGAGGAACAGTGGACAAAAGCTCT
CAAGTTCATGCTGACGAATCTTAAGTGGGGTCTTGCTTGGGTATCCTCACAGTTTTATAACAAATGA

Library Parental gene expression (RPM)
SRP017611_brain 52 .81 RPM
SRP017611_kidney 59 .33 RPM
SRP017611_liver 29 .07 RPM
ERP005899_muscle 54 .21 RPM
ERP005899_liver 15 .43 RPM
SRP030211_testis 65 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006867 ortholog_one2one 1 retrogene
retro_amel_16,
Dipodomys ordii ENSDORG00000000956 ortholog_one2one 1 retrogene
retro_dord_675,
Felis catus ENSFCAG00000013136 ortholog_one2one 1 retrogene
retro_fcat_62,
Homo sapiens ENSG00000126581 ortholog_one2one 1 retrogene
retro_hsap_335,
Macropus eugenii ENSMEUG00000011700 ortholog_one2many 1 retrogene
retro_meug_600,
Macaca mulatta ENSMMUG00000029971 ortholog_one2one 1 retrogene
retro_mmul_81,
Monodelphis domestica ENSMODG00000015064 ortholog_one2many 1 retrogene
retro_mdom_1778,
Mus musculus ENSMUSG00000035086 ortholog_one2one 1 retrogene
retro_mmus_390,
Nomascus leucogenys ENSNLEG00000011840 ortholog_one2one 1 retrogene
retro_nleu_1776,
Oryctolagus cuniculus ENSOCUG00000015964 ortholog_one2one 3 retrogenes
retro_ocun_1021, retro_ocun_1732, retro_ocun_218,
Procavia capensis ENSPCAG00000014049 ortholog_one2one 1 retrogene
retro_pcap_345,
Pan troglodytes ENSPTRG00000022819 ortholog_one2one 1 retrogene
retro_ptro_268,
Sorex araneus ENSSARG00000000367 ortholog_one2one 1 retrogene
retro_sara_136,
Sus scrofa ENSSSCG00000017386 ortholog_one2one 1 retrogene
retro_sscr_75,
Ictidomys tridecemlineatus ENSSTOG00000012612 ortholog_one2one 1 retrogene
retro_itri_25,
Tursiops truncatus ENSTTRG00000011716 ortholog_one2one 1 retrogene
retro_ttru_595,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_226 52.93 91.52
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Download FASTA sequences of all ENSBTAG00000019914 retrocopies