Parental gene:

DERL1, ENSCAFG00000000974

Aliases:None
Description:derlin 1 [Source:HGNC Symbol;Acc:28454]
Organism:Dog (Canis familiaris)
Coordinates:13:21422522..21452321(-)


>ENSCAFG00000000974
ATGTCGGACATCGGGGACTGGTTCAGGAGCATCCCGGCCATCACGCGCTATTGGTTCGCCGCCACTGTCGCGGTGCCCTT
GGTCGGCAAACTCGGTCTCATCAGCCCGGCCTACTTCTTCCTCTGGCCCGAAGCCTTCCTCTATCGCTTCCAGGTTTGGA
GGCCAATCACTGCCACCTTTTATTTCCCTGTGGGTCCAGGAACTGGATTTCTTTATTTGGTCAATTTATATTTCTTATAT
CAGTATTCTACACGACTTGAAACAGGAGCTTTTGATGGGAGGCCGGCAGACTATTTATTCATGCTCCTCTTTAACTGGAT
TTGCATCGTGATTACTGGCTTAGCAATGGATATGCAGTTGCTGATGATTCCTCTGATCATGTCAGTACTTTATGTCTGGG
CCCAACTGAACAGAGACATGATTGTATCGTTTTGGTTTGGAACGCGGTTTAAGGCCTGTTATTTACCTTGGGTTATCCTT
GGATTCAACTATATCATCGGAGGCTCGGTAATCAATGAGCTAATTGGAAATCTTGTTGGACATCTTTACTTCTTCCTAAT
GTTCAGATACCCGATGGACTTGGGAGGAAGGAATTTTCTCTCCACACCTCAGTTTCTGTACCGCTGGCTGCCCAGCAGGA
GAGGAGGGGTGTCAGGATTCGGTGTGCCCCCCGCAAGCATGAGGCGAGCTGCAGACCAGAACGGCGGAGGCGGGAGACAC
AACTGGGGACAGGGCTTTCGGCTTGGGGACCAGTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 67 .03 RPM
SRP017611_brain 39 .30 RPM
SRP017611_kidney 54 .41 RPM
SRP017611_liver 36 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006519 ortholog_one2one 1 retrogene
retro_amel_364,
Cavia porcellus ENSCPOG00000011870 ortholog_one2one 1 retrogene
retro_cpor_1520,
Myotis lucifugus ENSMLUG00000009085 ortholog_one2one 1 retrogene
retro_mluc_2035,
Mustela putorius furo ENSMPUG00000001132 ortholog_one2one 1 retrogene
retro_mputfur_1082,
Mus musculus ENSMUSG00000022365 ortholog_one2one 1 retrogene
retro_mmus_919,
Rattus norvegicus ENSRNOG00000005551 ortholog_one2one 2 retrogenes
retro_rnor_1206, retro_rnor_2717,
Sarcophilus harrisii ENSSHAG00000011915 ortholog_one2one 1 retrogene
retro_shar_588,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_754 74.06 94.02
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Download FASTA sequences of all ENSCAFG00000000974 retrocopies