Parental gene:

ENSCAFG00000005955

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:25:472776..493053(-)


>ENSCAFG00000005955
ATGAAGCCCAATCCTGCTATCCAAGCTGCCATTGACCTCACAGCAGGGGCTGCAGGGGGCACAGCATGTGTACTGACTGG
GCAGCCCTTTGACACACTGAAAGTGAAGATGCAGACATTCCCCGACCTGTACAGGGGCCTCACCGACTGCTGCCTGAAGA
CATACTCACAGGTGGGCTTCCGGGGCTTCTACAAGGGGACCAGCCCAGCGTTGATTGCCAATATCGCCGAGAACTCTGTC
CTCTTCATGTGCTACGGCTTCTGCCAACAGGTGGTGCGGAAAGTGGTTGGATTGGAAAAGCAGGCCAAGCTGAGTGATCT
GCAGAATGCAGCTGCTGGTTCCTTTGCCTCTGCCTTTGCTGCTCTGGTACTCTGCCCCACTGAGCTTGTGAAGTGCCGGC
TGCAGACCATGCATGAGATGGCATCGTCGGGAAAGATAGCCAACAGCCAGAACACCGTCTGGTCTGTGGTGAAGACTGTC
CTCAGGAAGGACGGCCCCTTGGGCTTCTACCATGGCCTCTCCAGCACTCTACTCCGAGAAGTGCCCGGCTATTTCTTCTT
CTTTGGAGGCTACGAGCTGAGCAGGTCGTTTTTTGCATCAGGGAAATCCAAGGATGAACTAGGCCCTGTCCCTTTGATGT
TAAGTGGTGGAGTTGGTGGAGTCTGCCTCTGGCTTGCTGTTTACCCAGTGGATTGCGTCAAATCCAGAATTCAGGTTCTT
TCCATGTCTGGAAAACAGGCAGGATTTATTGGAACCTTTATAAGCATTGTGAAAAATGAAGGAATAACAGCCTTATATTC
TGGACTGAAGCCTACTATGATTCGAGCGTTCCCTGCCAACGGGGCACTGTTTTTGGCCTATGAATACAGCAGGAAGCTGA
TGATGAGCCAGTTTGAAGCCTACTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 8 .19 RPM
SRP017611_brain 4 .29 RPM
SRP017611_kidney 24 .96 RPM
SRP017611_liver 75 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011723 ortholog_one2one 1 retrogene
retro_amel_5,
Bos taurus ENSBTAG00000011647 ortholog_one2one 1 retrogene
retro_btau_1581,
Choloepus hoffmanni ENSCHOG00000004899 ortholog_one2one 3 retrogenes
retro_chof_1643, retro_chof_494, retro_chof_561,
Erinaceus europaeus ENSEEUG00000014870 ortholog_one2one 1 retrogene
retro_eeur_329,
Mus musculus ENSMUSG00000031482 ortholog_one2one 1 retrogene
retro_mmus_75,
Oryctolagus cuniculus ENSOCUG00000016684 ortholog_one2one 2 retrogenes
retro_ocun_192, retro_ocun_1927,
Ochotona princeps ENSOPRG00000014616 ortholog_one2one 1 retrogene
retro_opri_7,
Rattus norvegicus ENSRNOG00000011881 ortholog_one2one 1 retrogene
retro_rnor_130,
Sorex araneus ENSSARG00000002472 ortholog_one2one 1 retrogene
retro_sara_30,
Sus scrofa ENSSSCG00000009373 ortholog_one2one 1 retrogene
retro_sscr_688,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_211 84.05 100.00
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Download FASTA sequences of all ENSCAFG00000005955 retrocopies