Parental gene:

ENSCJAG00000000250

Aliases:None
Description:Ferritin [Source:UniProtKB/TrEMBL;Acc:F7G1I6]
Organism:Marmoset (Callithrix jacchus)
Coordinates:22:40869950..40871570(+)


>ENSCJAG00000000250
ATGAGCTCCCAGATTCGTCAGAATTATTCCACCGACGTGGAGGCAGCCGTCAACCACCTGGTCAATGTGTACCTGCAGGC
CTCCTACACCTACCTCTCTCTGGGCTACTATTTCGACCGCGATGATGTAGCTCTGGAAGGCGTGAGCCACTTCTTCCGCG
AATTGGCCGAGGAGAAACGCGAGGGCTATGAGCGTCTCCTGAAGATGCAAAACCAGCGTGGCGGCCGCGCTCTCTTTCAG
GACATCAAGAAGCCGGCTCAAGATGAGTGGGGTAAAACCCTGGACGCCATGGAAGCCGCCATGGCCCTGGAGAAAAATCT
GAACCAGGCTCTTTTGGATCTTCATGCCCTGGGTTCTGCCCGCACGGACCCCCATCTCTGTGACTTCCTGGAGAGTCACT
TCCTAGATGAGGAAGTGAAAATCATCAAGAAGATGGGTGACCACCTGACCAACCTCCGCAGGCTGGCCAGCCCACAGGCT
GGGCTGGGCGAGTATCTCTTTGAAAGGCTCACTCTCAAGCACGACTAA

Library Parental gene expression (RPM)
SRP051959_colon 155 .67 RPM
SRP051959_heart 229 .58 RPM
SRP051959_kidney 988 .33 RPM
SRP051959_liver 921 .72 RPM
SRP051959_lung 497 .96 RPM
SRP051959_lymph_node 322 .20 RPM
SRP051959_skeletal_muscle 210 .45 RPM
SRP051959_spleen 1320 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014582 possible_ortholog 27 retrogenes
Bos taurus ENSBTAG00000013343 possible_ortholog 33 retrogenes
Canis familiaris ENSCAFG00000003861 possible_ortholog 1 retrogene
Callithrix jacchus ENSCJAG00000019089 other_paralog 16 retrogenes
Cavia porcellus ENSCPOG00000020558 possible_ortholog 1 retrogene
Dasypus novemcinctus ENSDNOG00000002455 possible_ortholog 9 retrogenes
Dasypus novemcinctus ENSDNOG00000004126 possible_ortholog 5 retrogenes
Dasypus novemcinctus ENSDNOG00000005577 possible_ortholog 36 retrogenes
Dasypus novemcinctus ENSDNOG00000007848 possible_ortholog 2 retrogenes
Dasypus novemcinctus ENSDNOG00000016683 possible_ortholog 8 retrogenes
Dipodomys ordii ENSDORG00000015550 possible_ortholog 5 retrogenes
Felis catus ENSFCAG00000003348 possible_ortholog 37 retrogenes
Homo sapiens ENSG00000087086 ortholog_one2many 11 retrogenes
Gorilla gorilla ENSGGOG00000011999 ortholog_many2many 9 retrogenes
Loxodonta africana ENSLAFG00000031248 possible_ortholog 11 retrogenes
Microcebus murinus ENSMICG00000001861 possible_ortholog 7 retrogenes
Macaca mulatta ENSMMUG00000003909 ortholog_many2many 9 retrogenes
Mustela putorius furo ENSMPUG00000003304 possible_ortholog 29 retrogenes
Mus musculus ENSMUSG00000050708 possible_ortholog 1 retrogene
Nomascus leucogenys ENSNLEG00000004716 ortholog_one2many 10 retrogenes
Oryctolagus cuniculus ENSOCUG00000000014 possible_ortholog 6 retrogenes
Ochotona princeps ENSOPRG00000002492 possible_ortholog 10 retrogenes
Procavia capensis ENSPCAG00000013227 possible_ortholog 6 retrogenes
Pongo abelii ENSPPYG00000010223 ortholog_one2many 11 retrogenes
Pan troglodytes ENSPTRG00000011268 ortholog_many2many 11 retrogenes
Pteropus vampyrus ENSPVAG00000009570 possible_ortholog 25 retrogenes
Rattus norvegicus ENSRNOG00000020843 possible_ortholog 7 retrogenes
Sorex araneus ENSSARG00000011741 possible_ortholog 12 retrogenes
Sus scrofa ENSSSCG00000003153 possible_ortholog 33 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000020639 possible_ortholog 7 retrogenes
Tupaia belangeri ENSTBEG00000005311 possible_ortholog 13 retrogenes
Tarsius syrichta ENSTSYG00000013988 possible_ortholog 56 retrogenes
Tursiops truncatus ENSTTRG00000001252 possible_ortholog 66 retrogenes
Vicugna pacos ENSVPAG00000005509 possible_ortholog 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_60 78.29 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cjac_556 88.98 66.86
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_cjac_889 66.67 84.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_cjac_997 81.76 88.57
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_cjac_1171 84.66 100.00
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_cjac_1208 79.44 60.57
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_cjac_1264 74.19 52.57
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_cjac_1643 78.70 61.71
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_cjac_2272 53.57 94.29
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_cjac_2780 88.89 82.29
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_cjac_3113 69.83 100.00
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_cjac_3254 87.14 80.00
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_cjac_3879 81.67 68.00
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSCJAG00000000250 retrocopies