Parental gene:

ZNF131, ENSCJAG00000001280

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:2:160175442..160224356(-)


>ENSCJAG00000001280
ATGGAGGCTGAAGAGACGATGGAATGCCTTCAGGAGTTCCCTGAACATCATAAAATGATCCTCGACCGATTGAATGAACA
GCGAGAGCAGGACCGGTTTACTGACATCACCCTGATTGTCGACGGACACCATTTTAAAGCTCACAAGGCTGTTTTGGCTG
CTTGCAGTAAGTTTTTCTACAAATTCTTTCAGGAGTTTACCCAAGAACCTTTGGTGGAGATAGAAGGTGTTAGTAAAATG
GCCTTTCGCCATTTAATTGAGTTCACATATACAGCAAAATTAATGATACAAGGAGAAGAAGAAGCCAATGACGTATGGAA
AGCAGCAGAGTTTCTACAAATGCTAGAAGCTATCAAAGCCCTTGAAGTCAGGAACAAAGAAAACTCAGCTCCATTAGAGG
AAAATACCACGGGAAAAAGTGAGGCCAAAAAAAGGAAGATTGCAGAAACTTCAAATGTTATCACTGAGTCATTGCCATCT
GCAGAATCAGAACCTGTTGAAATTGAGGTAGAGATTGCTGAAGGCACAATTGAAGTGGAAGATGAAGGCGTTGAAACATT
AGAGGAAGTGGCTTCTGCCAAGCAGTCCATAAAGTACATCCAGAGCACAGGTTCCTCTGATGATTCTGCTCTAGCACTGT
TGGCAGATATTACCAGCAAGTACCGTCAAGGTGACAGAAAAGGGCAGATTAAAGAAGATGACTGTGCATCTGACCCCACA
AGCAAACAGGTAGAAGGTATTGAAATTGTGGAACTTCAGCTGTCACATGTGAAGGACTTGTTCCATTGTGAGAAATGTAA
CCGTTCATTTAAATTGTTTTACCATTTTAAGGAACACATGAAATCACACTCCACTGAGAGTTTCAAGTGTGAAATATGCA
ATAAAAGGTATCTTCGAGAGAGCGCATGGAAACAGCACCTAAATTGTTACCACCTTGAGGAAGGTGGAGTCAGTAAGAAG
CAAAGAACTGGGAAAAAAATTCACGTATGTCAGTACTGTGAGAAGCAGTTTGACCATTTTGGACATTTTAAAGAACATCT
TCGAAAACATACAGGTGAGAAACCTTTTGAATGTCCAAATTGTCATGAACGATTTGCTAGAAATAGCACCCTCAAATGTC
ACCTCACTGCATGCCAAACTGGAGTAGGGGCAAAAAAAGGAAGGAAGAAGCTCTACGAATGCCAGGTCTGCAACAGTGTG
TTTAACAGCTGGGACCAGTTCAAAGATCACTTGGTAATACACACTGGAGATAAACCCAACCATTGTACTTTATGTGATTT
GTGGTTTATGCAAGGAAATGAATTAAGGAGGCATCTCAGTGATGCTCACAATATTTCAGAGCGTCTAGTAACAGAAGAAT
TTCTTTCAGTAGAAACACGTGTGCAAACTGAACCTGTAACATCAATGACTATTATAGAACAAGTTGGGAAGGTGCATGTG
CTACCATTGCTTCAGGTCCAGGTGGATTCAGCACAAGTAACTGTGGAACAAGTCCATCCAGATCTGCTCCAGGACAACCA
AGTGCACGATTCACACATAAGTGAGCTTCCAGAGCAGGTCCAAGTGAGTTATCTAGAAGTGGGTCGAATTCAGACTGAAG
AAGGTACTGAAGTACATGTAGAGGAGCTGCATGTTGAACGGGTAAATCAGATGCCAGTGGAAGTACAAACTGAACTTCTA
GAAGCAGACTTGGACCATGTGACCCCAGAAATCATGAACCAAGAGGAGAGAGAGCCTAGCCAAGCAGATGGTGCTGAGGC
TGCCAGGGAAGATCATGAAGATGCTGAGGATTTAGAGACCAAGCCAACAGTGGATTCTGAACCTGAAAAGGAAGAGAATG
AGGACAGAACAGCTATGCCAGTTTTAGAATGA

Library Parental gene expression (RPM)
SRP051959_spleen 13 .07 RPM
SRP051959_skeletal_muscle 9 .22 RPM
SRP051959_lymph_node 16 .67 RPM
SRP051959_lung 13 .26 RPM
SRP051959_liver 10 .53 RPM
SRP051959_kidney 9 .54 RPM
SRP051959_heart 9 .56 RPM
SRP051959_colon 9 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000011858 ortholog_one2many 1 retrogene
retro_cpor_350,
Echinops telfairi ENSETEG00000015357 possible_ortholog 1 retrogene
retro_etel_1596,
Gorilla gorilla ENSGGOG00000002252 ortholog_one2many 1 retrogene
retro_ggor_2485,
Ictidomys tridecemlineatus ENSSTOG00000015383 ortholog_one2many 1 retrogene
retro_itri_1485,
Tursiops truncatus ENSTTRG00000009644 ortholog_one2many 1 retrogene
retro_ttru_418,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2484 81.11 62.92
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Download FASTA sequences of all ENSCJAG00000001280 retrocopies