Parental gene: | AIDA, ENSDNOG00000008380 |
| Aliases: | None |
| Description: | axin interactor, dorsalization associated [Source:HGNC Symbol;Acc:25761] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_6559:1329..97698(-) |
>ENSDNOG00000008380
ATGTCGGAAGTGACCCGGAGCCTGCTGCAGCGCTGGGGCGCCAGTTTTAGGAGAGGCGCCGACTTCGACTCTTGGGGCCA
GCTGGTGGAGGCGATAGACGAGTATCAGATATTAGCAAGACATCTACAAAAAGAGGCCCAAGCGCAACATAATAATTCTG
AATTCACAGAAGAACAAAAGAAAACAATAGGCAAAATTGCAGCATGCTTGGAATTGCGAAGTGCAGCCTTACAGTCTACA
CAGTCCCAAGAAGAATTTAAACTGGAGGATTTGAAGAAGCTAGAACCAATCCTAAAGAATATTCTTACTTATAATAAAGA
ATTCCCATTTGACGTTCAGCCTGTCCCATTAAGAAGAATTTTAGCTCCTGGTGAAGAAGAGAATTTGGAATTTGAAGAAG
ATGAAGAGGAGGGGGGTGCTGGCGCTGGGTCTCCTGATTCCTTTCCTGCAAGAGTTCCTGGGACTTTATTACCAAGGTTA
CCGTCAGAACCAGGAATGACGTTACTCACCATCAGAATTGAGAAGATCGGTCTGAAGGATGCGGGGCAGTGCATCGATCC
CTATATTACAGTTAGTGTAAAGGATCTGAATGGCATAGATTTAACTCCTGTGCAAGATACTCCTGTGGCTTCAAGAAAAG
AAGATACATATGTTCATTTTAATGTGGACATTGAGCTCCAGAAGCATGTTGAAAAATTAACCAAAGGTGCAGCTATCTTC
TTTGAATTCAAACACTACAAGCCTAAGAAAAGATTTACCAGCACCAAGTGTTTTGCTTTCATGGAGATGGATGAACTTAA
ACCTGGGCCAATTGTAATAGAACTATACAAGAAACCCACTGACTTTAAAAGAAAGAAATTGCAGTTATTGACCAAGAAAC
CACTTTATCTTCACCTACATCAAACTTTGCACAAGGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 32 .48 RPM |
| SRP012922_cerebellum | 26 .39 RPM |
| SRP012922_heart | 12 .53 RPM |
| SRP012922_kidney | 14 .78 RPM |
| SRP012922_liver | 14 .24 RPM |
| SRP012922_lung | 32 .07 RPM |
| SRP012922_quadricep_muscle | 21 .64 RPM |
| SRP012922_spleen | 58 .26 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007593 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000010095 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000186063 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015289 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000015025 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000004774 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013583 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017030 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000000196 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000002010 | ortholog_one2one | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005745 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000016594 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1765 | 75.97 | 91.50 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
| 2. | retro_dnov_1909 | 66.86 | 54.58 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 3. | retro_dnov_1961 | 73.31 | 75.16 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 4. | retro_dnov_2172 | 81.33 | 53.27 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 5. | retro_dnov_2280 | 86.11 | 82.03 | Please wait, loading |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSDNOG00000008380 retrocopies