Parental gene:

VDAC2, ENSEEUG00000008623

Aliases:None
Description:voltage-dependent anion channel 2 [Source:HGNC Symbol;Acc:12672]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_6390:840..34421(+)


>ENSEEUG00000008623
ATGAGCCGGGGTGCGGAGCCGGCTCGTCGCAGGCTGCGCGGCGGTGGCTGCTGGGAGTGTCACGTTACAATGTGTATTCC
TCCATCATATGCTGACCTTGGCAAAGCTGCCAGAGATATTTTCAACAAAGGATTTGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGAATTTTCAACATCTGGTTCATCTAATACAGATACTGGTAAAGTTACTGGGACC
TTGGAGACCAAATATAAATGGTGTGAGTATGGTCTGACTTTCACAGAAAAATGGAACACTGATAACACTCTGGGAACAGA
AATTGCCATTGAAGACCAGATTTGCCAAGGTTTAAAATTGACATTTGATACCACCTTTTCACCAAACACGGGAAAGAAAA
GTGGTAAAATCAAGTCTTCTTACAAGAGAGAGTGTATAAACCTCGGTTGTGATGTTGACTTCGATTTTGCTGGACCTGCA
ATCCATGGTTCAGCTGTCTTTGGTTATGAGGGCTGGCTTGCTGGTTACCAAATGACCTTTGACAGTGCTAAATCAAAGTT
GACAAGGAATAACTTTGCAGTAGGCTACCGGACTGGGGACTTCCAGCTACACACTAATGTCAATGATGGGACAGAATTTG
GAGGATCAATTTATCAGAAAGTATGTGAAGATCTTGACACTTCAGTAAACCTTGCTTGGACTTCAGGAACCAACTGTACT
CGCTTTGGCATTGCAGCTAAGTATCAGTTGGATCCCACTGCTTCCATTTCT

Library Parental gene expression (RPM)
SRP017611_brain 150 .35 RPM
SRP017611_kidney 322 .38 RPM
SRP017611_liver 92 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Nomascus leucogenys ENSNLEG00000016857 ortholog_one2one 1 retrogene
retro_nleu_1608,
Rattus norvegicus ENSRNOG00000013505 possible_ortholog 1 retrogene
retro_rnor_2652,
Tupaia belangeri ENSTBEG00000001946 possible_ortholog 4 retrogenes
retro_tbel_1504, retro_tbel_1541, retro_tbel_1885, retro_tbel_4597,
Vicugna pacos ENSVPAG00000008068 possible_ortholog 1 retrogene
retro_vpac_156,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_192 71.23 56.81
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2. retro_eeur_343 71.23 56.81
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Download FASTA sequences of all ENSEEUG00000008623 retrocopies