Parental gene:

MRPS7, ENSEEUG00000015775

Aliases:None
Description:mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:14499]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_3218:51960..55736(+)


>ENSEEUG00000015775
ATGGCTGCCCCCGTGCTGAGCACTGTGCGAGGGTGGGCGAGACTAGTGCTCAACTTGCCGAACGCCGGCCTGAAGCTTCC
AGGAATCCAGGTGAGGTGGAGGCGCTATTGTTCTGAAATCATGGATCCCCCGACTGACGACTATTACCGCCAGGCCCTTG
GGGAACTGAGTGAGGAAGAGAAGTATGAGCGAGAGCTAAAGAAAACTCGGCTGATCAAAGCTGCCCCAGCGGCAAAAACA
AGTTCTGTGTTTGAAGACCCTGTGATCAGTAAATTCACAAACATGATAATGAAAGGAGGAAACAAAATACTGGCCAGATC
CCTCGTGACACAGACTCTGGAAGCTGTGAAAAGGAAGCAATTTGAGAAGTACCATACTGCTTCTGCAGAAACTCAGGCAG
CCATTGAGCGTAACCCCTACACCATCTTCCACCAAGCACTGAAAAACTGTGAACCTGTGATTGGGCTGGTACCCATTCTC
AGGGGTGCCCATTTCTACCAGGTCCCTGTGCCACTAGCAGAGCGACGCCGTCGCTTCCTGGCTATGAAGTGGATGATTAC
TGAGTGCAGGAAGAAGAACCGGAGGATGCTATTGCCAGAGAAGTTGTCACATGAGCTGATAGAGGCTTTTCACAACCAAG
GTCCTGTGATCAAGAAGAAGCACGAGATGCACAAGATGGCTGAGGCCAACCGAGCGCTGGCCCACTACCGTTGGTGGTAG

Library Parental gene expression (RPM)
SRP017611_brain 18 .85 RPM
SRP017611_kidney 39 .95 RPM
SRP017611_liver 19 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009287 ortholog_one2one 1 retrogene
retro_amel_1444,
Canis familiaris ENSCAFG00000004752 ortholog_one2one 5 retrogenes
retro_cfam_2020, retro_cfam_2197, retro_cfam_438, retro_cfam_443, retro_cfam_540,
Callithrix jacchus ENSCJAG00000014458 ortholog_one2many 2 retrogenes
retro_cjac_290, retro_cjac_3316,
Felis catus ENSFCAG00000028759 ortholog_one2one 2 retrogenes
retro_fcat_2013, retro_fcat_424,
Loxodonta africana ENSLAFG00000002873 ortholog_one2one 1 retrogene
retro_lafr_945,
Macropus eugenii ENSMEUG00000012264 ortholog_one2one 1 retrogene
retro_meug_1826,
Mustela putorius furo ENSMPUG00000013928 ortholog_one2one 1 retrogene
retro_mputfur_976,
Procavia capensis ENSPCAG00000015942 ortholog_one2one 1 retrogene
retro_pcap_327,
Pteropus vampyrus ENSPVAG00000008433 ortholog_one2one 3 retrogenes
retro_pvam_610, retro_pvam_615, retro_pvam_678,
Ictidomys tridecemlineatus ENSSTOG00000015200 ortholog_one2one 2 retrogenes
retro_itri_1805, retro_itri_461,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_212 79.30 93.72
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Download FASTA sequences of all ENSEEUG00000015775 retrocopies