Parental gene:

RPL36, ENSETEG00000012943

Aliases:None
Description:ribosomal protein L36 [Source:HGNC Symbol;Acc:13631]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_3370:567..1892(+)


>ENSETEG00000012943
ATGGCTGTGCGCTACCCTATGGCCGTGGGCCTCGATAAGGGCCACAAGGTGACCAAGAACGTGAGCAAGCCGAGGCACAG
CCGCCGCCGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATCCGGGAGGTGTGTGGCTTTGCACCCTACG
AGCGAAGGGCCATGGAGCTGCTCAAGGTCTCCAAGGACAAGCGGGCACTTAAGTTCATCAAGAAGCGGGTGGGCACACAC
ATCCGGGCTAAGAGGAAGAGAGAGGAGCTAAGCAACGTGCTTGCAGCCATGAGGAAGGCCGCTGCCAAGAAGGACTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012349 ortholog_one2one 6 retrogenes
retro_amel_1222, retro_amel_1581, retro_amel_1935, retro_amel_748, retro_amel_799, retro_amel_835,
Bos taurus ENSBTAG00000001794 possible_ortholog 3 retrogenes
retro_btau_139, retro_btau_238, retro_btau_81,
Callithrix jacchus ENSCJAG00000017072 possible_ortholog 2 retrogenes
retro_cjac_280, retro_cjac_52,
Dasypus novemcinctus ENSDNOG00000005163 possible_ortholog 8 retrogenes
retro_dnov_19, retro_dnov_2160, retro_dnov_311, retro_dnov_313, retro_dnov_457, retro_dnov_578, retro_dnov_595, retro_dnov_631,
Felis catus ENSFCAG00000011838 possible_ortholog 5 retrogenes
retro_fcat_1152, retro_fcat_1168, retro_fcat_1216, retro_fcat_406, retro_fcat_94,
Gorilla gorilla ENSGGOG00000015365 possible_ortholog 11 retrogenes
retro_ggor_1514, retro_ggor_1613, retro_ggor_180, retro_ggor_2211, retro_ggor_2535, retro_ggor_2620, retro_ggor_34, retro_ggor_487, retro_ggor_60, retro_ggor_82, retro_ggor_885,
Latimeria chalumnae ENSLACG00000015161 ortholog_one2one 1 retrogene
retro_lcha_47,
Macropus eugenii ENSMEUG00000002743 ortholog_one2many 4 retrogenes
retro_meug_1318, retro_meug_176, retro_meug_261, retro_meug_283,
Monodelphis domestica ENSMODG00000001275 ortholog_one2many 2 retrogenes
retro_mdom_1353, retro_mdom_148,
Mustela putorius furo ENSMPUG00000006166 possible_ortholog 6 retrogenes
retro_mputfur_1423, retro_mputfur_150, retro_mputfur_1562, retro_mputfur_747, retro_mputfur_749, retro_mputfur_773,
Mus musculus ENSMUSG00000057863 possible_ortholog 9 retrogenes
retro_mmus_151, retro_mmus_1601, retro_mmus_1900, retro_mmus_1912, retro_mmus_193, retro_mmus_2864, retro_mmus_3379, retro_mmus_38, retro_mmus_652,
Otolemur garnettii ENSOGAG00000027049 possible_ortholog 12 retrogenes
retro_ogar_1348, retro_ogar_18, retro_ogar_184, retro_ogar_2256, retro_ogar_2278, retro_ogar_2332, retro_ogar_2537, retro_ogar_2592, retro_ogar_3278, retro_ogar_358, retro_ogar_795, retro_ogar_888,
Pongo abelii ENSPPYG00000009431 possible_ortholog 12 retrogenes
retro_pabe_1194, retro_pabe_137, retro_pabe_1639, retro_pabe_1792, retro_pabe_1834, retro_pabe_1898, retro_pabe_216, retro_pabe_3081, retro_pabe_3173, retro_pabe_318, retro_pabe_3443, retro_pabe_3688,
Rattus norvegicus ENSRNOG00000033473 possible_ortholog 5 retrogenes
retro_rnor_11, retro_rnor_17, retro_rnor_170, retro_rnor_369, retro_rnor_687,
Sarcophilus harrisii ENSSHAG00000013492 ortholog_one2one 8 retrogenes
retro_shar_185, retro_shar_347, retro_shar_543, retro_shar_557, retro_shar_592, retro_shar_615, retro_shar_716, retro_shar_819,
Ictidomys tridecemlineatus ENSSTOG00000020518 possible_ortholog 2 retrogenes
retro_itri_43, retro_itri_593,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_78 80.00 99.05
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2. retro_etel_139 77.57 100.00
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3. retro_etel_342 85.71 100.00
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4. retro_etel_575 89.52 100.00
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5. retro_etel_908 86.67 100.00
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6. retro_etel_922 72.38 100.00
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7. retro_etel_1168 68.67 78.10
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8. retro_etel_1199 88.46 99.05
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9. retro_etel_1315 60.20 92.38
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10. retro_etel_1336 78.30 100.00
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11. retro_etel_1396 60.00 94.29
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12. retro_etel_1425 80.95 99.05
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13. retro_etel_1432 85.71 100.00
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14. retro_etel_1528 66.32 86.67
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15. retro_etel_2168 86.67 100.00
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Download FASTA sequences of all ENSETEG00000012943 retrocopies