Parental gene:

RPL26, ENSG00000161970

Aliases:RPL26, DBA11, L26
Description:ribosomal protein L26 [Source:HGNC Symbol;Acc:10327]
Organism:Human (Homo sapiens)
Coordinates:17:8280837..8286531(-)


>ENSG00000161970
ATGAAGTTTAATCCCTTTGTGACTTCCGACCGAAGCAAGAATCGCAAAAGGCATTTCAATGCACCTTCCCACATTCGAAG
GAAGATTATGTCTTCCCCTCTTTCCAAAGAGCTGAGACAGAAGTACAACGTGCGATCCATGCCCATCCGAAAGGATGATG
AAGTTCAGGTTGTACGTGGACACTATAAAGGTCAGCAAATTGGCAAAGTAGTCCAGGTTTACAGGAAGAAATATGTTATC
TACATTGAACGGGTGCAGCGGGAAAAGGCTAATGGCACAACTGTCCACGTAGGCATTCACCCCAGCAAGGTGGTTATCAC
TAGGCTAAAACTGGACAAAGACCGCAAAAAGATCCTCGAACGGAAAGCCAAATCTCGCCAAGTAGGAAAGGAAAAGGGCA
AATACAAGGAAGAAACCATTGAGAAGATGCAGGAATAA

Library Parental gene expression (RPM)
bodymap2_adipose 230 .25 RPM
bodymap2_adrenal 312 .12 RPM
bodymap2_brain 131 .90 RPM
bodymap2_breast 213 .50 RPM
bodymap2_colon 447 .49 RPM
bodymap2_heart 108 .92 RPM
bodymap2_kidney 180 .52 RPM
bodymap2_liver 109 .88 RPM
bodymap2_lung 352 .18 RPM
bodymap2_lymph_node 392 .35 RPM
bodymap2_ovary 384 .53 RPM
bodymap2_prostate 473 .22 RPM
bodymap2_skeletal_muscle 246 .63 RPM
bodymap2_testis 253 .88 RPM
bodymap2_thyroid 176 .26 RPM
bodymap2_white_blood_cells 432 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002453 possible_ortholog 7 retrogenes
retro_amel_1175, retro_amel_1535, retro_amel_1885, retro_amel_1934, retro_amel_360, retro_amel_499, retro_amel_900,
Bos taurus ENSBTAG00000012344 possible_ortholog 2 retrogenes
retro_btau_1090, retro_btau_230,
Choloepus hoffmanni ENSCHOG00000004703 possible_ortholog 10 retrogenes
retro_chof_149, retro_chof_1893, retro_chof_2147, retro_chof_2276, retro_chof_2333, retro_chof_2383, retro_chof_244, retro_chof_312, retro_chof_816, retro_chof_942,
Callithrix jacchus ENSCJAG00000014372 possible_ortholog 8 retrogenes
retro_cjac_110, retro_cjac_119, retro_cjac_240, retro_cjac_250, retro_cjac_270, retro_cjac_297, retro_cjac_321, retro_cjac_362,
Cavia porcellus ENSCPOG00000001315 ortholog_one2one 10 retrogenes
retro_cpor_1009, retro_cpor_1161, retro_cpor_1346, retro_cpor_1421, retro_cpor_1503, retro_cpor_1526, retro_cpor_167, retro_cpor_522, retro_cpor_585, retro_cpor_858,
Dasypus novemcinctus ENSDNOG00000002470 possible_ortholog 3 retrogenes
retro_dnov_2054, retro_dnov_2174, retro_dnov_378,
Equus caballus ENSECAG00000015757 possible_ortholog 4 retrogenes
retro_ecab_429, retro_ecab_473, retro_ecab_515, retro_ecab_609,
Homo sapiens ENSG00000037241 within_species_paralog 2 retrogenes
retro_hsap_586, retro_hsap_837,
Gorilla gorilla ENSGGOG00000023944 possible_ortholog 4 retrogenes
retro_ggor_2565, retro_ggor_270, retro_ggor_51, retro_ggor_974,
Macropus eugenii ENSMEUG00000009891 ortholog_one2one 7 retrogenes
retro_meug_1239, retro_meug_1538, retro_meug_1607, retro_meug_1827, retro_meug_262, retro_meug_322, retro_meug_534,
Myotis lucifugus ENSMLUG00000002176 ortholog_one2many 1 retrogene
retro_mluc_232,
Macaca mulatta ENSMMUG00000003448 possible_ortholog 22 retrogenes
retro_mmul_1117, retro_mmul_1361, retro_mmul_1398, retro_mmul_1497, retro_mmul_1710, retro_mmul_1773, retro_mmul_1899, retro_mmul_1986, retro_mmul_2052, retro_mmul_2163, retro_mmul_2332, retro_mmul_2344, retro_mmul_325, retro_mmul_360, retro_mmul_398, retro_mmul_405, retro_mmul_448, retro_mmul_548, retro_mmul_805, retro_mmul_903, retro_mmul_920, retro_mmul_992,
Monodelphis domestica ENSMODG00000006201 possible_ortholog 2 retrogenes
retro_mdom_36, retro_mdom_64,
Mustela putorius furo ENSMPUG00000007988 possible_ortholog 12 retrogenes
retro_mputfur_1003, retro_mputfur_1146, retro_mputfur_1385, retro_mputfur_1428, retro_mputfur_1595, retro_mputfur_251, retro_mputfur_365, retro_mputfur_395, retro_mputfur_488, retro_mputfur_522, retro_mputfur_643, retro_mputfur_685,
Nomascus leucogenys ENSNLEG00000009981 possible_ortholog 1 retrogene
retro_nleu_76,
Otolemur garnettii ENSOGAG00000017070 ortholog_one2one 3 retrogenes
retro_ogar_118, retro_ogar_255, retro_ogar_66,
Pan troglodytes ENSPTRG00000008742 possible_ortholog 3 retrogenes
retro_ptro_1546, retro_ptro_2510, retro_ptro_73,
Rattus norvegicus ENSRNOG00000004214 possible_ortholog 3 retrogenes
retro_rnor_213, retro_rnor_260, retro_rnor_273,
Sorex araneus ENSSARG00000005798 possible_ortholog 13 retrogenes
retro_sara_172, retro_sara_208, retro_sara_228, retro_sara_273, retro_sara_319, retro_sara_334, retro_sara_393, retro_sara_527, retro_sara_578, retro_sara_627, retro_sara_641, retro_sara_656, retro_sara_740,
Sarcophilus harrisii ENSSHAG00000006890 possible_ortholog 1 retrogene
retro_shar_458,
Sus scrofa ENSSSCG00000028850 possible_ortholog 9 retrogenes
retro_sscr_261, retro_sscr_363, retro_sscr_426, retro_sscr_427, retro_sscr_471, retro_sscr_485, retro_sscr_508, retro_sscr_609, retro_sscr_736,
Ictidomys tridecemlineatus ENSSTOG00000021923 ortholog_one2one 6 retrogenes
retro_itri_1113, retro_itri_1145, retro_itri_1206, retro_itri_1262, retro_itri_1670, retro_itri_811,
Tupaia belangeri ENSTBEG00000007749 possible_ortholog 53 retrogenes
retro_tbel_1053, retro_tbel_1088, retro_tbel_1103, retro_tbel_1140, retro_tbel_1366, retro_tbel_1389, retro_tbel_1390, retro_tbel_1391, retro_tbel_1433, retro_tbel_1497, retro_tbel_1512, retro_tbel_1767, retro_tbel_1793, retro_tbel_1928, retro_tbel_1930, retro_tbel_2005, retro_tbel_2033, retro_tbel_2053, retro_tbel_2057, retro_tbel_2099, retro_tbel_2105, retro_tbel_2332, retro_tbel_2416, retro_tbel_2465, retro_tbel_2500, retro_tbel_268, retro_tbel_2727, retro_tbel_2778, retro_tbel_2806, retro_tbel_2884, retro_tbel_3020, retro_tbel_3187, retro_tbel_3300, retro_tbel_3332, retro_tbel_3704, retro_tbel_3711, retro_tbel_3790, retro_tbel_3964, retro_tbel_404, retro_tbel_4162, retro_tbel_4200, retro_tbel_4381, retro_tbel_4416, retro_tbel_446, retro_tbel_4480, retro_tbel_470, retro_tbel_474, retro_tbel_495, retro_tbel_573, retro_tbel_863, retro_tbel_906, retro_tbel_964, retro_tbel_99,
Tarsius syrichta ENSTSYG00000001483 possible_ortholog 17 retrogenes
retro_tsyr_1273, retro_tsyr_1274, retro_tsyr_1499, retro_tsyr_153, retro_tsyr_1705, retro_tsyr_1858, retro_tsyr_1869, retro_tsyr_2152, retro_tsyr_262, retro_tsyr_327, retro_tsyr_346, retro_tsyr_600, retro_tsyr_636, retro_tsyr_684, retro_tsyr_808, retro_tsyr_865, retro_tsyr_905,
Vicugna pacos ENSVPAG00000000279 possible_ortholog 4 retrogenes
retro_vpac_214, retro_vpac_255, retro_vpac_26, retro_vpac_357,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_191 67.38 98.52
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2. retro_hsap_253 88.97 100.00
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3. retro_hsap_267 85.58 70.34
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4. retro_hsap_642 78.62 100.00
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5. retro_hsap_691 91.03 100.00
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6. retro_hsap_915 73.83 100.00
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7. retro_hsap_998 85.52 100.00
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8. retro_hsap_1137 94.48 100.00
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9. retro_hsap_1309 66.39 82.76
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10. retro_hsap_1376 93.79 100.00
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11. retro_hsap_1394 80.69 100.00
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12. retro_hsap_2108 83.56 100.00
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13. retro_hsap_2165 70.83 99.31
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14. retro_hsap_2253 73.47 100.00
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15. retro_hsap_2946 78.68 93.79
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16. retro_hsap_3118 85.09 77.93
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17. retro_hsap_3260 81.51 99.31
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18. retro_hsap_3324 96.55 100.00
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19. retro_hsap_3490 72.30 99.31
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20. retro_hsap_3700 85.37 84.14
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21. retro_hsap_3803 82.86 96.55
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22. retro_hsap_3813 88.46 89.66
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23. retro_hsap_3914 82.86 96.55
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24. retro_hsap_4043 71.05 77.93
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25. retro_hsap_4061 71.01 99.26
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26. retro_hsap_4874 88.79 80.00
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27. retro_hsap_4932 85.52 100.00
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Download FASTA sequences of all ENSG00000161970 retrocopies