Parental gene:

PSIP1, ENSG00000164985

Aliases:PSIP1, DFS70, LEDGF, PAIP, PSIP2, p52, p75
Description:PC4 and SFRS1 interacting protein 1 [Source:HGNC Symbol;Acc:9527]
Organism:Human (Homo sapiens)
Coordinates:9:15464063..15511017(-)


>ENSG00000164985
ATGACTCGCGATTTCAAACCTGGAGACCTCATCTTCGCCAAGATGAAAGGTTATCCCCATTGGCCAGCTCGAGTAGACGA
AGTTCCTGATGGAGCTGTAAAGCCACCCACAAACAAACTACCCATTTTCTTTTTTGGAACTCATGAGACTGCTTTTTTAG
GACCAAAGGATATATTTCCTTACTCAGAAAATAAGGAAAAGTATGGCAAACCAAATAAAAGAAAAGGTTTTAATGAAGGT
TTATGGGAGATAGATAACAATCCAAAAGTGAAATTTTCAAGTCAACAGGCAGCAACTAAACAATCAAATGCATCATCTGA
TGTTGAAGTTGAAGAAAAGGAAACTAGTGTTTCAAAGGAAGATACCGACCATGAAGAAAAAGCCAGCAATGAGGATGTGA
CTAAAGCAGTTGACATAACTACTCCAAAAGCTGCCAGAAGGGGGAGAAAGAGAAAGGCAGAAAAACAAGTAGAAACTGAG
GAGGCAGGAGTAGTGACAACAGCAACAGCATCTGTTAATCTAAAAGTGAGTCCTAAAAGAGGACGACCTGCAGCTACAGA
AGTCAAGATTCCAAAACCAAGAGGCAGACCCAAAATGGTAAAACAGCCCTGTCCTTCAGAGAGTGACATCATTACTGAAG
AGGACAAAAGTAAGAAAAAGGGGCAAGAGGAAAAACAACCTAAAAAGCAGCCTAAGAAGGATGAAGAGGGCCAGAAGGAA
GAAGATAAGCCAAGAAAAGAGCCGGATAAAAAAGAGGGGAAGAAAGAAGTTGAATCAAAAAGGAAAAATTTAGCTAAAAC
AGGGGTTACTTCAACCTCCGATTCTGAAGAAGAAGGAGATGATCAAGAAGGTGAAAAGAAGAGAAAAGGTGGGAGGAACT
TTCAGACTGCTCACAGAAGGAATATGCTGAAAGGCCAACATGAGAAAGAAGCAGCAGATCGAAAACGCAAGCAAGAGGAA
CAAATGGAAACTGAGCAGCAGAATAAAGATGAAGGAAAGAAGCCAGAAGTTAAGAAAGTGGAGAAGAAGCGAGAAACATC
AATGGATTCTCGACTTCAAAGGATACATGCTGAGATTAAAAATTCACTCAAAATTGATAATCTTGATGTGAACAGATGCA
TTGAGGCCTTGGATGAACTTGCTTCACTTCAGGTCACAATGCAACAAGCTCAGAAACACACAGAGATGATTACTACACTG
AAAAAAATACGGCGATTCAAAGTTAGTCAGGTAATCATGGAAAAGTCTACAATGTTGTATAACAAGTTTAAGAACATGTT
CTTGGTTGGTGAAGGAGATTCCGTGATCACCCAAGTGCTGAATAAATCTCTTGCTGAACAAAGACAGCATGAGGAAGCGA
ATAAAACCAAAGATCAAGGGAAGAAAGGGCCAAACAAAAAGCTAGAGAAGGAACAAACAGGGTCAAAGACTCTAAATGGA
GGATCTGATGCTCAAGATGGTAATCAGCCACAACATAACGGGGAGAGCAATGAAGACAGCAAAGACAACCATGAAGCCAG
CACGAAGAAAAAGCCATCCAGTGAAGAGAGAGAGACTGAAATATCTCTGAAGGATTCTACACTAGATAACTAG

Library Parental gene expression (RPM)
bodymap2_adipose 66 .51 RPM
bodymap2_adrenal 117 .52 RPM
bodymap2_brain 272 .37 RPM
bodymap2_breast 63 .31 RPM
bodymap2_colon 150 .65 RPM
bodymap2_heart 39 .64 RPM
bodymap2_kidney 70 .58 RPM
bodymap2_liver 15 .08 RPM
bodymap2_lung 75 .67 RPM
bodymap2_lymph_node 105 .11 RPM
bodymap2_ovary 266 .00 RPM
bodymap2_prostate 146 .27 RPM
bodymap2_skeletal_muscle 37 .21 RPM
bodymap2_testis 249 .86 RPM
bodymap2_thyroid 106 .66 RPM
bodymap2_white_blood_cells 134 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012471 ortholog_one2one 1 retrogene
retro_cjac_4069,
Homo sapiens ENSG00000143321 within_species_paralog 1 retrogene
retro_hsap_33,
Mus musculus ENSMUSG00000028484 ortholog_one2one 1 retrogene
retro_mmus_2896,
Pan troglodytes ENSPTRG00000020786 ortholog_one2one 1 retrogene
retro_ptro_2811,
Tupaia belangeri ENSTBEG00000000715 ortholog_one2one 1 retrogene
retro_tbel_364,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4136 91.32 99.70
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Download FASTA sequences of all ENSG00000164985 retrocopies