Parental gene:

KPNA2, ENSG00000182481

Aliases:KPNA2, IPOA1, QIP2, RCH1, SRP1alpha
Description:karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:HGNC Symbol;Acc:6395]
Organism:Human (Homo sapiens)
Coordinates:17:66031634..66042958(+)


>ENSG00000182481
ATGTCCACCAACGAGAATGCTAATACACCAGCTGCCCGTCTTCACAGATTCAAGAACAAGGGAAAAGACAGTACAGAAAT
GAGGCGTCGCAGAATAGAGGTCAATGTGGAGCTGAGGAAAGCTAAGAAGGATGACCAGATGCTGAAGAGGAGAAATGTAA
GCTCATTTCCTGATGATGCTACTTCTCCGCTGCAGGAAAACCGCAACAACCAGGGCACTGTAAATTGGTCTGTTGATGAC
ATTGTCAAAGGCATAAATAGCAGCAATGTGGAAAATCAGCTCCAAGCTACTCAAGCTGCCAGGAAACTACTTTCCAGAGA
AAAACAGCCCCCCATAGACAACATAATCCGGGCTGGTTTGATTCCGAAATTTGTGTCCTTCTTGGGCAGAACTGATTGTA
GTCCCATTCAGTTTGAATCTGCTTGGGCACTCACTAACATTGCTTCTGGGACATCAGAACAAACCAAGGCTGTGGTAGAT
GGAGGTGCCATCCCAGCATTCATTTCTCTGTTGGCATCTCCCCATGCTCACATCAGTGAACAAGCTGTCTGGGCTCTAGG
AAACATTGCAGGTGATGGCTCAGTGTTCCGAGACTTGGTTATTAAGTACGGTGCAGTTGACCCACTGTTGGCTCTCCTTG
CAGTTCCTGATATGTCATCTTTAGCATGTGGCTACTTACGTAATCTTACCTGGACACTTTCTAATCTTTGCCGCAACAAG
AATCCTGCACCCCCGATAGATGCTGTTGAGCAGATTCTTCCTACCTTAGTTCGGCTCCTGCATCATGATGATCCAGAAGT
ATTAGCAGATACCTGCTGGGCTATTTCCTACCTTACTGATGGTCCAAATGAACGAATTGGCATGGTGGTGAAAACAGGAG
TTGTGCCCCAACTTGTGAAGCTTCTAGGAGCTTCTGAATTGCCAATTGTGACTCCTGCCCTAAGAGCCATAGGGAATATT
GTCACTGGTACAGATGAACAGACTCAGGTTGTGATTGATGCAGGAGCACTCGCCGTCTTTCCCAGCCTGCTCACCAACCC
CAAAACTAACATTCAGAAGGAAGCTACGTGGACAATGTCAAACATCACAGCCGGCCGCCAGGACCAGATACAGCAAGTTG
TGAATCATGGATTAGTCCCATTCCTTGTCAGTGTTCTCTCTAAGGCAGATTTTAAGACACAAAAGGAAGCTGTGTGGGCC
GTGACCAACTATACCAGTGGTGGAACAGTTGAACAGATTGTGTACCTTGTTCACTGTGGCATAATAGAACCGTTGATGAA
CCTCTTAACTGCAAAAGATACCAAGATTATTCTGGTTATCCTGGATGCCATTTCAAATATCTTTCAGGCTGCTGAGAAAC
TAGGTGAAACTGAGAAACTTAGTATAATGATTGAAGAATGTGGAGGCTTAGACAAAATTGAAGCTCTACAAAACCATGAA
AATGAGTCTGTGTATAAGGCTTCGTTAAGCTTAATTGAGAAGTATTTCTCTGTAGAGGAAGAGGAAGATCAAAACGTTGT
ACCAGAAACTACCTCTGAAGGCTACACTTTCCAAGTTCAGGATGGGGCTCCTGGGACCTTTAACTTTTAG

Library Parental gene expression (RPM)
bodymap2_adipose 19 .72 RPM
bodymap2_adrenal 30 .72 RPM
bodymap2_brain 47 .33 RPM
bodymap2_breast 25 .14 RPM
bodymap2_colon 22 .66 RPM
bodymap2_heart 22 .50 RPM
bodymap2_kidney 37 .04 RPM
bodymap2_liver 21 .29 RPM
bodymap2_lung 33 .77 RPM
bodymap2_lymph_node 37 .04 RPM
bodymap2_ovary 27 .47 RPM
bodymap2_prostate 11 .66 RPM
bodymap2_skeletal_muscle 12 .55 RPM
bodymap2_testis 347 .33 RPM
bodymap2_thyroid 20 .62 RPM
bodymap2_white_blood_cells 29 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018411 possible_ortholog 3 retrogenes
retro_amel_1161, retro_amel_1318, retro_amel_440,
Canis familiaris ENSCAFG00000011598 possible_ortholog 2 retrogenes
retro_cfam_648, retro_cfam_90,
Cavia porcellus ENSCPOG00000026318 ortholog_one2many 1 retrogene
retro_cpor_46,
Dasypus novemcinctus ENSDNOG00000019151 possible_ortholog 6 retrogenes
retro_dnov_1184, retro_dnov_1811, retro_dnov_2161, retro_dnov_2279, retro_dnov_379, retro_dnov_693,
Echinops telfairi ENSETEG00000004445 ortholog_one2one 2 retrogenes
retro_etel_346, retro_etel_347,
Felis catus ENSFCAG00000001936 ortholog_one2one 2 retrogenes
retro_fcat_1176, retro_fcat_921,
Homo sapiens ENSG00000185467 within_species_paralog 1 retrogene
retro_hsap_3337,
Gorilla gorilla ENSGGOG00000027535 ortholog_one2one 2 retrogenes
retro_ggor_2044, retro_ggor_2609,
Myotis lucifugus ENSMLUG00000027946 ortholog_one2many 7 retrogenes
retro_mluc_1034, retro_mluc_1258, retro_mluc_1414, retro_mluc_288, retro_mluc_50, retro_mluc_52, retro_mluc_993,
Macaca mulatta ENSMMUG00000018256 ortholog_one2one 3 retrogenes
retro_mmul_1140, retro_mmul_1635, retro_mmul_1947,
Monodelphis domestica ENSMODG00000003897 ortholog_one2many 1 retrogene
retro_mdom_271,
Mus musculus ENSMUSG00000018362 ortholog_one2many 1 retrogene
retro_mmus_229,
Nomascus leucogenys ENSNLEG00000001749 ortholog_one2one 3 retrogenes
retro_nleu_1052, retro_nleu_1634, retro_nleu_208,
Otolemur garnettii ENSOGAG00000027672 possible_ortholog 7 retrogenes
retro_ogar_1044, retro_ogar_1142, retro_ogar_1757, retro_ogar_2008, retro_ogar_464, retro_ogar_477, retro_ogar_936,
Pongo abelii ENSPPYG00000008569 possible_ortholog 1 retrogene
retro_pabe_3501,
Pteropus vampyrus ENSPVAG00000004976 ortholog_one2one 2 retrogenes
retro_pvam_1321, retro_pvam_1333,
Rattus norvegicus ENSRNOG00000015329 ortholog_one2many 1 retrogene
retro_rnor_42,
Sarcophilus harrisii ENSSHAG00000011391 ortholog_one2one 1 retrogene
retro_shar_165,
Vicugna pacos ENSVPAG00000001855 ortholog_one2one 3 retrogenes
retro_vpac_124, retro_vpac_162, retro_vpac_163,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2950 86.28 100.00
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Download FASTA sequences of all ENSG00000182481 retrocopies