Parental gene:

SUPT4H1, ENSG00000213246

Aliases:SUPT4H1, SPT4, SPT4H, SUPT4H
Description:suppressor of Ty 4 homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:11467]
Organism:Human (Homo sapiens)
Coordinates:17:56422538..56430454(-)


>ENSG00000213246
ATGGCCCTGGAGACGGTGCCGAAGGACCTGCGGCATCTGCGGGCCTGTTTGCTGTGTTCGCTGGTCAAGACTATAGACCA
GTTTGAATATGATGGTTGTGACAATTGTGATGCATATCTACAAATGAAGGGTAACCGAGAGATGGTATATGACTGCACTA
GCTCTTCCTTTGATGGAATCATTGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTT
AAGCCAGGTGTATATGCGGTGTCAGTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAGCTGAAAAGTCGAGGAGTGGC
CTACAAATCCAGAGACACAGCTATAAAGACCTAG

Library Parental gene expression (RPM)
bodymap2_adipose 24 .35 RPM
bodymap2_adrenal 47 .61 RPM
bodymap2_brain 34 .97 RPM
bodymap2_breast 30 .99 RPM
bodymap2_colon 40 .01 RPM
bodymap2_heart 30 .04 RPM
bodymap2_kidney 43 .72 RPM
bodymap2_liver 32 .19 RPM
bodymap2_lung 43 .30 RPM
bodymap2_lymph_node 58 .31 RPM
bodymap2_ovary 36 .59 RPM
bodymap2_prostate 56 .48 RPM
bodymap2_skeletal_muscle 23 .94 RPM
bodymap2_testis 44 .95 RPM
bodymap2_thyroid 37 .72 RPM
bodymap2_white_blood_cells 113 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000017524 ortholog_one2one 2 retrogenes
retro_cfam_1399, retro_cfam_553,
Gorilla gorilla ENSGGOG00000007232 ortholog_one2one 2 retrogenes
retro_ggor_1693, retro_ggor_854,
Macropus eugenii ENSMEUG00000010164 ortholog_one2one 1 retrogene
retro_meug_2079,
Myotis lucifugus ENSMLUG00000025583 possible_ortholog 1 retrogene
retro_mluc_761,
Macaca mulatta ENSMMUG00000007579 ortholog_one2one 2 retrogenes
retro_mmul_1005, retro_mmul_842,
Mus musculus ENSMUSG00000020485 ortholog_one2one 2 retrogenes
retro_mmus_2857, retro_mmus_633,
Nomascus leucogenys ENSNLEG00000008159 ortholog_one2one 3 retrogenes
retro_nleu_1619, retro_nleu_1962, retro_nleu_2714,
Oryctolagus cuniculus ENSOCUG00000025823 ortholog_one2one 2 retrogenes
retro_ocun_1613, retro_ocun_1636,
Pongo abelii ENSPPYG00000008233 ortholog_one2one 1 retrogene
retro_pabe_1940,
Pan troglodytes ENSPTRG00000009451 ortholog_one2one 2 retrogenes
retro_ptro_1614, retro_ptro_735,
Pteropus vampyrus ENSPVAG00000002320 ortholog_one2one 1 retrogene
retro_pvam_477,
Rattus norvegicus ENSRNOG00000007845 ortholog_one2one 3 retrogenes
retro_rnor_1255, retro_rnor_1973, retro_rnor_556,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1081 88.30 80.34
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2. retro_hsap_2280 89.71 58.12
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Download FASTA sequences of all ENSG00000213246 retrocopies