Parental gene:

PSMD10, ENSGGOG00000002969

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:X:105476607..105484023(-)


>ENSGGOG00000002969
AGTTGCTGGGACAGCGAAATGGAGGGGTGTGTGTCTAACCTAATGGTCTGCAACCTGGCCTACAGCGGGAAGCTGGAAGA
GTTGAAGGAGAGTATTCTGGCCGATAAATCCCTGGCTACTAGAACTGACCAGGACAGCAGAACTGCATTGCACTGGGCAT
GCTCAGCTGGACATACAGAAATTGTTGAATTTTTGTTGCAACTTGGAGTGCCAGTGAATGATAAAGACGATGCAGGTTGG
TCTCCTCTTCATATTGCGGCTTCTGCTGGCCGGGATGAGATTGTAAAAGCCCTTCTGGGAAAAGGTGCTCAAGTGAATGC
TGTCAATCAAAATGGTTGTACTCCCTTACATTATGCAGCTTCGAAAAACAGGCATGAGATCGCTGTCATGTTACTGGAAG
GCGGGGCTAATCCAGATGCTAAGGACCATTATGAGGCTACAGCAATGCACCGGGCAGCAGCCAAGGGTAACTTGAAGATG
ATTCATATCCTTCTCTACTACAAAGCATCCACAAACATCCAAGACACTGAGGGTAACACTCCTCTACACTTAGCCTGTGA
TGAGGAGAGAGTGGAAGAAGCAAAACTGCTGGTGTCCCAAGGAGCAAGTATTTACATTGAGAATAAAGAAGAAAAGACAC
CCCTGCAAGTGGCCAAAGGTGGCCTGGGTTTAATACTCAAGAGAATGGTGGAAGGTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 34 .67 RPM
SRP007412_cerebellum 29 .63 RPM
SRP007412_heart 3 .91 RPM
SRP007412_kidney 21 .18 RPM
SRP007412_liver 13 .08 RPM
SRP007412_testis 26 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000012006 ortholog_one2one 1 retrogene
retro_acar_134,
Callithrix jacchus ENSCJAG00000007717 ortholog_one2many 1 retrogene
retro_cjac_2515,
Cavia porcellus ENSCPOG00000015068 possible_ortholog 1 retrogene
retro_cpor_358,
Dasypus novemcinctus ENSDNOG00000001902 ortholog_one2one 5 retrogenes
retro_dnov_1194, retro_dnov_208, retro_dnov_705, retro_dnov_824, retro_dnov_835,
Homo sapiens ENSG00000101843 ortholog_one2one 3 retrogenes
retro_hsap_1214, retro_hsap_2435, retro_hsap_2737,
Macaca mulatta ENSMMUG00000016981 possible_ortholog 1 retrogene
retro_mmul_1290,
Nomascus leucogenys ENSNLEG00000014001 ortholog_one2one 2 retrogenes
retro_nleu_243, retro_nleu_690,
Oryctolagus cuniculus ENSOCUG00000010837 ortholog_one2many 1 retrogene
retro_ocun_793,
Otolemur garnettii ENSOGAG00000006419 ortholog_one2many 1 retrogene
retro_ogar_213,
Procavia capensis ENSPCAG00000005221 ortholog_one2one 1 retrogene
retro_pcap_461,
Pongo abelii ENSPPYG00000020618 ortholog_one2one 3 retrogenes
retro_pabe_1010, retro_pabe_1793, retro_pabe_2275,
Pan troglodytes ENSPTRG00000022169 ortholog_one2one 3 retrogenes
retro_ptro_1407, retro_ptro_1851, retro_ptro_831,
Ictidomys tridecemlineatus ENSSTOG00000003783 ortholog_one2one 3 retrogenes
retro_itri_1684, retro_itri_312, retro_itri_676,
Tarsius syrichta ENSTSYG00000009920 ortholog_one2one 13 retrogenes
retro_tsyr_1160, retro_tsyr_1674, retro_tsyr_1684, retro_tsyr_1741, retro_tsyr_1830, retro_tsyr_1968, retro_tsyr_1989, retro_tsyr_2010, retro_tsyr_2138, retro_tsyr_2151, retro_tsyr_2167, retro_tsyr_674, retro_tsyr_803,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_945 89.03 66.38
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2. retro_ggor_1515 79.68 80.17
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3. retro_ggor_1906 83.26 100.00
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Download FASTA sequences of all ENSGGOG00000002969 retrocopies