Parental gene:

MMU.1980, ENSMMUG00000012448

Aliases:None
Description:T-complex protein 1 subunit eta [Source:RefSeq peptide;Acc:NP_001252680]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:13:73538274..73556613(+)


>ENSMMUG00000012448
ATGATGCCCACACCAGTTATCCTATTGAAAGAGGGGACTGATAGCTCCCAAGGCATACCCCAGCTTGTGAGTAACATCAG
TGCCTGCCAGGTGATTGCTGAAGCTGTAAGAACCACCTTGGGTCCCCGTGGCATGGACAAGCTTATTGTGGATGGCAGAG
GCAAAGCAACAATTTCTAATGATGGGGCCACAATTCTGAAACTTCTTGATGTTGTCCATCCTGCAGCAAAGACTTTGGTA
GACATTGCCAAATCCCAAGATGCTGAGGTGGGTGATGGCACCACCTCAGTGACCTTGCTGGCTGCAGAGTTTCTGAAGCA
AGTGAAACCCTATGTGGAGGAAGGTTTACACCCCCAGATCATCATTCGAGCTTTCCGCACAGCCACCCAGCTGGCGGTTA
ACAAGATCAAAGAGATTGCTGTGACTGTGAAGAAGGCAGATAAAGTGGAGCAGAGGAAGCTGCTGGAAAAGTGTGCCATG
ACTGCTTTGAGCTCCAAGCTGATCTCCCAGCAGAAAGCTTTCTTTGCTAAGATGGTGGTGGATGCAGTGATGATGCTCGA
TGATTTGCTGCAGCTTAAAATGATTGGAATCAAGAAGGTACAGGGTGGAGCCCTCGAGGATTCTCAGCTGGTAGCTGGTG
TTGCATTCAAGAAGACTTTCTCTTACGCTGGGTTTGAAATGCAACCCAAGAAGTACCACAATCCTAAGATCGCCCTTTTG
AATGTCGAGCTCGAGTTGAAAGCTGAGAAGGACAATGCTGAGATAAGAGTCCACACAGTTGAGGATTATCAGGCAATTGT
TGATGCTGAGTGGAACATTCTCTATGACAAGTTAGAGAAGATCCATCATTCTGGAGCCAAAGTTGTCTTGTCCAAACTCC
CCATTGGGGATGTGGCCACCCAGTACTTTGCTGACAGGGACATGTTCTGTGCTGGCCGAGTACCTGAGGAGGATCTGAAG
AGGACAATGATGGCGTGTGGAGGCTCAATCCAGACCAGTGTGAATGCTCTGTCAGCAGATGTGCTGGGTCGATGTCAGGT
GTTTGAAGAGACCCAGATTGGAGGCGAGAGGTACAATTTTTTTACTGGCTGCCCCAAGGCCAAGACATGTACCTTCATCC
TCCGTGGCGGTGCCGAGCAGTTTATGGAGGAGACAGAGCGGTCCCTGCATGATGCCATCATGATCGTCAGGAGGGCCATC
AAGAATGATTCAGTGGTGGCTGGTGGTGGGGCCATTGAGATGGAGCTCTCCAAGTACCTGCGGGATTACTCAAGGACTAT
TCCAGGAAAACAGCAGCTGTTGATTGGGGCGTATGCCAAGGCCTTGGAGATTATCCCACGCCAGCTGTGTGACAATGCTG
GCTTTGATGCCACAAACATTCTCAACAAACTGCGGGCTCGGCATGCCCAGGGGGGCACGTGGTATGGGGTGGACATCAAC
AACGAGGACATTGCTGACAACTTTGAGGCCTTCGTGTGGGAGCCAGCTATGGTGCGGATCAATGCGTTGACAGCAGCCTC
TGAGGCTGCGTGCCTGATCGTGTCTGTAGATGAAACCATCAAGAACCCCCGCTCAACTGTGGATGCTCCCCCAGCAGCAG
GCCGGGGCCGTGGTCGTGGCCGCCCGCACTGA

Library Parental gene expression (RPM)
SRP007412_brain 81 .91 RPM
SRP007412_brain_prefrontal_cortex 113 .84 RPM
SRP007412_cerebellum 107 .39 RPM
SRP007412_heart 94 .51 RPM
SRP007412_kidney 84 .74 RPM
SRP007412_liver 93 .54 RPM
SRP007412_testis 220 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008879 ortholog_many2many 1 retrogene
retro_cfam_151,
Choloepus hoffmanni ENSCHOG00000007937 possible_ortholog 1 retrogene
retro_chof_2313,
Cavia porcellus ENSCPOG00000019869 ortholog_one2many 1 retrogene
retro_cpor_1458,
Echinops telfairi ENSETEG00000009409 possible_ortholog 2 retrogenes
retro_etel_1478, retro_etel_607,
Homo sapiens ENSG00000135624 ortholog_one2one 1 retrogene
retro_hsap_3354,
Gorilla gorilla ENSGGOG00000007766 ortholog_one2one 1 retrogene
retro_ggor_2274,
Macropus eugenii ENSMEUG00000000416 ortholog_one2many 1 retrogene
retro_meug_1995,
Nomascus leucogenys ENSNLEG00000010414 ortholog_one2one 1 retrogene
retro_nleu_1175,
Otolemur garnettii ENSOGAG00000009162 ortholog_one2many 2 retrogenes
retro_ogar_2001, retro_ogar_2698,
Pongo abelii ENSPPYG00000012297 ortholog_one2one 1 retrogene
retro_pabe_2760,
Pan troglodytes ENSPTRG00000012060 ortholog_one2one 1 retrogene
retro_ptro_2133,
Rattus norvegicus ENSRNOG00000015630 ortholog_one2many 2 retrogenes
retro_rnor_2179, retro_rnor_535,
Sorex araneus ENSSARG00000011475 possible_ortholog 1 retrogene
retro_sara_539,
Tupaia belangeri ENSTBEG00000002066 ortholog_one2many 2 retrogenes
retro_tbel_3708, retro_tbel_3751,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2093 72.09 78.64
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Download FASTA sequences of all ENSMMUG00000012448 retrocopies