Parental gene: | Trmt10a, ENSMUSG00000004127 |
| Aliases: | Trmt10a, 3110023L08Rik, AA794508, Rg9mtd2, Rnmtd2 |
| Description: | tRNA methyltransferase 10A [Source:MGI Symbol;Acc:MGI:1920421] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 3:138143447..138159821(+) |
>ENSMUSG00000004127
ATGAATATGTCATCTGAAATGCTGCCAGCATCCATCGAGTCTACTAATGTGGAGGAAAAGCTGGGTACGAGTGACGGTGA
AGAGGAGAGACAGGAGCCTAGAGTGGATGCAGGGGCTGAGCCAATATCTAAACGGCAACTGAAGAAGCTGATGAAACAAA
AACAGTGGGAAGAGCAACGTGAACAGCGCAAGGAGAAACGAAAAGAAAAACGGAAGAGAAAGAAATTAGAACGACGCCAG
CTGGAGTCCAACTCAGATGGCAACGACAGGAAGCGCGTTCGGAGAGATGTTGCTCGCAGCAGCCTCCGCCTGGTCATCGA
CTGTAGCTTTGATGACTTGATGGTGTTAAAGGATATTAAGAAACTTCATAAACAGATTCAACGATGTTATGCAGAAAACC
GCCGAGCCTCTCATCCAGTGCAGTTTTACTTGACAAGCCATGGAGGTCAACTGAAGAAGAACATGGATGAGAACGACCAA
GGATGGGTCAACTGGAAGGATATTCACATCAAGTCAGAGCACTATAGTGAACTCATAAAAAAAGAAGACCTGGTTTATCT
GACGTCAGACTCACCTAATGTACTGAAGGACTTAGATGAGTCAAAGGCCTACGTGATTGGAGGGCTAGTGGACCACAACC
ATCACAAGGGACTCACATTTAAACAAGCAACCAGTTACGGAATCGAACATGCACAGCTCCCTCTTGCAGATTTTGTGAAG
ATGAACAGTCGAAAAGTCCTGGCCGTTAACCATGTGTTTGAAATTATCCTGGAGTTCTTGGAAACAAGAGACTGGCAAGA
GGCATTCTTTACAATCTTACCCCAACGGAAAGGGGCCGTTCCTGCTCACAAGGCCTGCGAAAGCTCTCCTCAGGACCACC
AGTCCCTGCCAGAAGGATGGGACAGTGCCAGCGAGGGAGAGAGTTGCAGGGATAATCCTGTCTCACCACAGAAAGACGAG
CAGGGCCAGCAGAGCAGCCCGGTTCTGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 5 .89 RPM |
| SRP007412_cerebellum | 4 .86 RPM |
| SRP007412_heart | 1 .81 RPM |
| SRP007412_kidney | 4 .31 RPM |
| SRP007412_liver | 4 .34 RPM |
| SRP007412_testis | 66 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001076 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000009090 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000015213 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005330 | ortholog_one2many | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000005064 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_3007 | 84.96 | 68.18 | Please wait, loading  |
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| 2. | retro_mmus_3008 | 81.69 | 64.24 | Please wait, loading |
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| 3. | retro_mmus_3368 | 77.30 | 84.55 | Please wait, loading |
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Download FASTA sequences of all ENSMUSG00000004127 retrocopies