Parental gene:

Kif2c, ENSMUSG00000028678

Aliases:Kif2c, 4930402F02Rik, ESTM5, Knsl6, MCAK, X83316
Description:kinesin family member 2C [Source:MGI Symbol;Acc:MGI:1921054]
Organism:Mouse (Mus musculus)
Coordinates:4:117159638..117182639(-)


>ENSMUSG00000028678
ATGGAGTCGCTTCACGCACGCCTGTTTCCTGGTCTCTCCATCAACATTCAACGCAGCAATGGCTTAATTCACCCCGCCAA
TATAAGCACAGTGAACGTGGAGAAATCCTGTGTTTCGGTGGAATGGATCGAAGGAGGTACCACAAAAGGCAAAGAGATTG
ACATTGACGATGTGGCTGCAATAAACCCAGAGCTCCTACAGCTTCTTCCCTTACGACCGAAGGACAGTCTGCCACTGCAG
GAAAACGTAACGGTCCCGAAGCAAAAACGCAAATCAGTCAACTCCAAAATTCCAGCTCTAAAAGAAGGCCTTCGAAGCCG
CTCCACTCGCATGTCCACTGTCTCAGAAGTTCGAATCCCTGCTCAGGAGAATGAAATGGAGGTGGAGCTGCCTGTGCCTA
CAAACTCTCGCAAGCAGTTTGCCATTCCCAGCCACCCTCGGGCCTCCTGCTCCACAGTGACAGAATTGCCGTTGTTGATG
GTCAGTGAGGAGGCAGAAGAGCAAGCCCACTCCACCCGCAGTACCTCATCTGCAAACCCTGGGAACTCAGTTCGGAGGAA
ATCGTGTATCGTGAAGGAGATGGAGAAAATGAAGAACAAGCGTGAAGAGAAGAGGGCCCAGAACTCGGAGCTAAGAATAA
AGCGAGCACAGGAATATGACAGCAGCTTTCCAAACTGGGAATTTGCCCGGATGATCAAAGAATTTCGGGTTACTATGGAA
TGTAGCCCGCTTACTGTGACAGACCCTATCGAAGAGCACAGGATCTGTGTCTGTGTCAGGAAACGCCCACTGAATAAACA
AGAACTGGCCAAGAAAGAAATCGATGTGATTTCTGTTCCCAGCAAGTGTCTCCTCCTGGTGCATGAACCCAAGTTAAAAG
TGGACTTAACGAAGTACCTGGAGAACCAAGCTTTCTGCTTTGACTTTGCATTTGATGAGACAGCTTCCAATGAAGTTGTC
TACAGGTTCACAGCAAGGCCACTGGTACAGACGATTTTTGAAGGGGGAAAAGCAACATGCTTTGCCTATGGACAGACAGG
CAGTGGGAAGACACATACAATGGGTGGAGATCTGTCTGGTAAAAGTCAGAACGCATCTAAAGGGATCTACGCCATGGCTT
CCCGGGATGTCTTCCTTCTGAAGAACCAGCCTCGGTACCGGAACTTAAACCTGGAAGTTTATGTGACATTCTTCGAGATC
TACAATGGGAAGGTGTTTGATCTGCTCAACAAAAAGGCCAAGTTACGTGTGCTGGAGGACAGCAGGCAGCAGGTGCAGGT
TGTGGGACTGCAGGAGTACCTGGTCACCTGTGCTGATGATGTCATCAAGATGATCAACATGGGCAGTGCCTGCAGGACTT
CTGGACAAACATTTGCCAACTCCAATTCCTCCCGCTCCCACGCCTGCTTCCAGATTCTTCTTCGAACTAAAGGGAGATTA
CATGGCAAATTCTCTTTGGTGGATCTGGCAGGGAATGAACGAGGGGCCGACACATCTAGTGCTGACCGGCAGACTCGCAT
GGAGGGAGCAGAAATTAACAAGTCTCTCCTGGCTCTGAAGGAGTGCATCCGGGCGCTGGGACAGAACAAGGCTCACACCC
CGTTCCGTGAGAGCAAGCTGACCCAGGTGCTGAGGGACTCGTTCATTGGGGAGAACTCGAGGACCTGCATGATCGCCATG
ATCTCACCAGGCATAAGCTCCTGTGAATACACCTTAAACACGCTGAGATACGCAGACAGAGTCAAGGAGCTAAGCCCCCA
CAGCGGACCCAGTGGAGAGCAGCCGGTTCAGATGGAAACAGAAGTGATGGAAGCCAGCTCTAATGGGACGTCTCTGACTG
GCAATGAAGAGGAGGAGCTGTCTTCCCAGATGTCCAGCTTTAATGAAGCCATGACTCAGATCAGGGAGCTGGAAGAGAGG
GCCCTGGAAGAGCTCAGAGAGATCATACAGCAAGGACCAAACTGGCTTGAGCTCTCCGAGATGACAGATCAGCCAGACTA
TGACTTGGAGACCTTTGTGAACAAAGCAGAATCTGCCCTGACACAGCAGGCTAAGCAGGCGAAGCACTTCTCAGCCCTTC
GAGAAGTCATCAAGGCCCTGCGCCTAGCCATGCAACTGGAAGAACAGGCTAGCAAACAAATAAACAGCAAGAAACGGCAC
CAATGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .33 RPM
SRP007412_cerebellum 0 .04 RPM
SRP007412_heart 0 .44 RPM
SRP007412_kidney 0 .87 RPM
SRP007412_liver 0 .19 RPM
SRP007412_testis 365 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Mus musculus ENSMUSG00000021693 within_species_paralog 1 retrogene
retro_mmus_68,
Mus musculus ENSMUSG00000030677 within_species_paralog 1 retrogene
retro_mmus_471,
Otolemur garnettii ENSOGAG00000006916 ortholog_one2one 1 retrogene
retro_ogar_1892,
Pongo abelii ENSPPYG00000001427 ortholog_one2one 1 retrogene
retro_pabe_88,
Pteropus vampyrus ENSPVAG00000009856 ortholog_one2one 1 retrogene
retro_pvam_3,
Sus scrofa ENSSSCG00000003931 ortholog_one2one 1 retrogene
retro_sscr_25,
Tursiops truncatus ENSTTRG00000000748 ortholog_one2one 1 retrogene
retro_ttru_1318,
Drosophila melanogaster FBgn0030268 ortholog_many2many 2 retrogenes
retro_dmel_1, retro_dmel_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1251 84.37 55.22
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Download FASTA sequences of all ENSMUSG00000028678 retrocopies