Parental gene:

Usp22, ENSMUSG00000042506

Aliases:Usp22, AI427806
Description:ubiquitin specific peptidase 22 [Source:MGI Symbol;Acc:MGI:2144157]
Organism:Mouse (Mus musculus)
Coordinates:11:61151784..61175055(-)


>ENSMUSG00000042506
ATGGTGGCCAGGCCGGAGCCTGAGGTCGAGGCCATGGACGCTGAGCTGGCGGTACCGCCGCCTGGCTGCTCGCACCTGGG
CAGCTTCAAGGTGGACAACTGGAAGCAAAACCTGCGGGCCATCTACCAGTGCTTCGTGTGGAGCGGAACTGCCGAGGCTC
GCAAGCGCAAGGCAAAGTCCTGTGTCTGCCATGTCTGCGGCATCCACCTGAACCGGCTGCACTCTTGCCTCTACTGTGTC
TTCTTTGGCTGTTTCACGAAGAAGCACATCCATGACCATGCCAAGTCAAAGCGACACAACCTGGCCATCGACCTGATGTA
CGGAGGTATTTACTGCTTCTTGTGTCAGGACTACATCTATGACAAAGACATAGAAATCATTGCCAAAGAGGAGCAGCGCA
AGGCTTGGAAGATGCAAGGTGTTGGAGAGAAGTTTTCAACTTGGGAACCAACTAAACGGGAGCTGGAACTGCTGAAGCAT
AACCCAAAGAGGCGGAAGATCACCTCCAATTGTACCATAGGTCTGCGTGGACTGATCAACCTGGGGAACACGTGTTTCAT
GAACTGCATCGTGCAGGCGCTGACCCACACTCCGCTCCTGAGAGACTTCTTTCTGTCGGATAGGCACCGCTGTGAGATGC
AGAGCCCCAGCTCCTGCTTGGTCTGTGAGATGTCCTCTCTCTTCCAGGAGTTTTACTCAGGGCACCGCTCCCCACACATT
CCATACAAGCTGCTGCACCTGGTGTGGACGCACGCCCGGCACCTGGCGGGTTATGAGCAGCAGGACGCACATGAGTTCCT
CATTGCAGCCCTGGACGTCCTCCACCGGCACTGCAAAGGTGATGACAATGGGAAGAAAGCCAACAATCCTAACCACTGCA
ATTGCATCATTGACCAGATCTTTACGGGTGGGCTCCAGTCTGATGTTACATGCCAAGTCTGCCACGGGGTCTCCACCACC
ATAGACCCCTTCTGGGACATCAGTTTAGACCTTCCCGGTTCTTCTACCCCATTCTGGCCCTTGAGCCCAGGGAGCGAGGG
CAGTGTGGTTAATGGGGAGAGCCATGCATCCGGGACCACCACTCTCACAGACTGCCTGCGAAGATTTACCAGACCAGAGC
ACTTAGGAAGCAGTGCCAAGATCAAGTGTAGCGGTTGCCATAGCTACCAAGAGTCCACAAAGCAGCTCACCATGAAGAAG
CTGCCCATTGTGGCCTGTTTCCATCTCAAACGATTTGAACACTCAGCCAAACTTCGGCGGAAGATCACCACATATGTGTC
TTTTCCCCTGGAACTGGACATGACGCCCTTCATGGCCTCCAGCAAAGAGAGCAGGATGAATGGGCAATACCAGCAGCCCC
TGGACAGTCTCAACAATGACAACAAATACTCCCTGTTTGCTGTCGTTAACCATCAAGGGACCTTGGAGAGTGGCCACTAC
ACCAGCTTCATCCGGCAGCACAAAGACCAGTGGTTCAAGTGTGATGACGCCATTATCACCAAGGCCAGCATCAAAGATGT
ACTGGACAGTGAAGGGTACCTACTCTTCTATCACAAACAGTTCCTGGAATACGAGTAG

Library Parental gene expression (RPM)
SRP007412_brain 271 .92 RPM
SRP007412_cerebellum 202 .78 RPM
SRP007412_heart 39 .78 RPM
SRP007412_kidney 48 .97 RPM
SRP007412_liver 36 .27 RPM
SRP007412_testis 23 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000008978 ortholog_one2one 1 retrogene
retro_btau_82,
Canis familiaris ENSCAFG00000018523 ortholog_one2one 1 retrogene
retro_cfam_125,
Homo sapiens ENSG00000124422 ortholog_one2one 1 retrogene
retro_hsap_26,
Microcebus murinus ENSMICG00000009998 ortholog_one2one 1 retrogene
retro_mmur_1,
Otolemur garnettii ENSOGAG00000015801 ortholog_one2one 1 retrogene
retro_ogar_274,
Pan troglodytes ENSPTRG00000008891 ortholog_one2one 1 retrogene
retro_ptro_44,
Pteropus vampyrus ENSPVAG00000001934 ortholog_one2one 1 retrogene
retro_pvam_905,
Ictidomys tridecemlineatus ENSSTOG00000023814 ortholog_one2one 1 retrogene
retro_itri_163,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_239 83.33 75.43
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Download FASTA sequences of all ENSMUSG00000042506 retrocopies