RetrogeneDB - Parental gene ENSMUSG00000061787 details

                            
>ENSMUSG00000061787
ATGGGCCGCGTTCGCACCAAGACCGTGAAGAAGGCTGCCCGGGTCATCATCGAGAAGTACTACACGCGTCTGGGTAATGA

CTTCCACACCAACAAGCGCGTGTGCGAGGAGATCGCCATTATCCCCAGCAAGAAGCTTCGGAACAAGATAGCCGGCTATG

TCACGCATCTGATGAAGCGGATTCAGAGAGGGCCTGTGAGAGGCATCTCTATCAAGTTGCAGGAAGAAGAGAGAGAGAGG

AGAGATAACTACGTTCCTGAGGTCTCAGCCCTAGATCAGGAGATCATTGAGGTGGATCCCGACACCAAGGAGATGCTGAA

GCTCCTGGACTTTGGCAGTCTCTCTAACCTTCAGGTCACTCAGCCTACAGTTGGCATGAATTTCAAAACACCACGTGGAG

CTGTTTAA

Library	Parental gene expression (RPM)
SRP007412_brain	44 .76 RPM
SRP007412_cerebellum	37 .91 RPM
SRP007412_heart	90 .78 RPM
SRP007412_kidney	88 .05 RPM
SRP007412_liver	73 .27 RPM
SRP007412_testis	57 .40 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Anolis carolinensis	ENSACAG00000012225	ortholog_one2one	4 retrogenes	retro_acar_128, retro_acar_154, retro_acar_177, retro_acar_81,
Bos taurus	ENSBTAG00000000622	ortholog_one2one	4 retrogenes	retro_btau_1014, retro_btau_568, retro_btau_731, retro_btau_884,
Canis familiaris	ENSCAFG00000013053	possible_ortholog	9 retrogenes	retro_cfam_1032, retro_cfam_1234, retro_cfam_1680, retro_cfam_1707, retro_cfam_217, retro_cfam_240, retro_cfam_307, retro_cfam_491, retro_cfam_82,
Dasypus novemcinctus	ENSDNOG00000012633	ortholog_one2one	6 retrogenes	retro_dnov_1183, retro_dnov_1296, retro_dnov_2140, retro_dnov_2636, retro_dnov_416, retro_dnov_673,
Equus caballus	ENSECAG00000024902	possible_ortholog	1 retrogene	retro_ecab_92,
Echinops telfairi	ENSETEG00000008035	ortholog_one2one	10 retrogenes	retro_etel_1279, retro_etel_1375, retro_etel_1501, retro_etel_1658, retro_etel_1950, retro_etel_592, retro_etel_619, retro_etel_673, retro_etel_851, retro_etel_984,
Felis catus	ENSFCAG00000002358	ortholog_one2one	7 retrogenes	retro_fcat_1060, retro_fcat_1354, retro_fcat_1419, retro_fcat_1549, retro_fcat_288, retro_fcat_436, retro_fcat_710,
Homo sapiens	ENSG00000182774	possible_ortholog	11 retrogenes	retro_hsap_1516, retro_hsap_1743, retro_hsap_2150, retro_hsap_2702, retro_hsap_3172, retro_hsap_3477, retro_hsap_3570, retro_hsap_3588, retro_hsap_3719, retro_hsap_464, retro_hsap_925,
Homo sapiens	ENSG00000184779	possible_ortholog	5 retrogenes	retro_hsap_2559, retro_hsap_2854, retro_hsap_3233, retro_hsap_3909, retro_hsap_4110,
Myotis lucifugus	ENSMLUG00000022830	possible_ortholog	3 retrogenes	retro_mluc_1202, retro_mluc_1347, retro_mluc_1949,
Macaca mulatta	ENSMMUG00000011327	possible_ortholog	6 retrogenes	retro_mmul_116, retro_mmul_194, retro_mmul_200, retro_mmul_266, retro_mmul_67, retro_mmul_99,
Monodelphis domestica	ENSMODG00000002011	ortholog_one2one	9 retrogenes	retro_mdom_1482, retro_mdom_1923, retro_mdom_1928, retro_mdom_330, retro_mdom_342, retro_mdom_422, retro_mdom_425, retro_mdom_645, retro_mdom_762,
Oryctolagus cuniculus	ENSOCUG00000006370	possible_ortholog	1 retrogene	retro_ocun_90,
Otolemur garnettii	ENSOGAG00000024107	ortholog_one2one	16 retrogenes	retro_ogar_1342, retro_ogar_14, retro_ogar_1632, retro_ogar_174, retro_ogar_1902, retro_ogar_2146, retro_ogar_2221, retro_ogar_2392, retro_ogar_2547, retro_ogar_2686, retro_ogar_2744, retro_ogar_3059, retro_ogar_439, retro_ogar_579, retro_ogar_647, retro_ogar_752,
Pongo abelii	ENSPPYG00000006888	possible_ortholog	3 retrogenes	retro_pabe_108, retro_pabe_194, retro_pabe_72,
Pteropus vampyrus	ENSPVAG00000012022	ortholog_one2one	8 retrogenes	retro_pvam_1172, retro_pvam_1263, retro_pvam_332, retro_pvam_411, retro_pvam_413, retro_pvam_603, retro_pvam_739, retro_pvam_823,
Rattus norvegicus	ENSRNOG00000019106	ortholog_one2many	6 retrogenes	retro_rnor_19, retro_rnor_23, retro_rnor_276, retro_rnor_285, retro_rnor_289, retro_rnor_84,
Sorex araneus	ENSSARG00000013001	ortholog_one2one	2 retrogenes	retro_sara_246, retro_sara_388,
Sus scrofa	ENSSSCG00000027358	ortholog_one2one	2 retrogenes	retro_sscr_408, retro_sscr_91,
Ictidomys tridecemlineatus	ENSSTOG00000006298	ortholog_one2one	2 retrogenes	retro_itri_769, retro_itri_841,
Tursiops truncatus	ENSTTRG00000013011	ortholog_one2one	2 retrogenes	retro_ttru_1467, retro_ttru_683,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_mmus_549	79.65	81.48	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_mmus_697	92.48	98.52	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_mmus_909	74.53	78.52	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_mmus_972	92.59	100.00	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_mmus_1095	84.26	78.52	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_mmus_1396	80.74	100.00	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_mmus_1630	87.59	100.00	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_mmus_2457	79.51	88.89	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_mmus_2805	61.25	58.52	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_mmus_2852	59.74	55.56	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_mmus_3382	86.76	100.00	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_mmus_3608	94.07	100.00	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSMUSG00000061787 retrocopies

Parental gene:	Rps17, ENSMUSG00000061787
Aliases:	None
Description:	ribosomal protein S17 [Source:MGI Symbol;Acc:MGI:1309526]
Organism:	*Mouse (Mus musculus)*
Coordinates:	7:81342731..81345254(-)

Parental gene:

Rps17, ENSMUSG00000061787