Parental gene: | LAMTOR5, ENSOPRG00000004283 |
| Aliases: | None |
| Description: | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:HGNC Symbol;Acc:17955] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | scaffold_253:459979..463865(-) |
>ENSOPRG00000004283
GCAGGCCGCAGCACTCTGGAATTCAGACGTGGTGCTGTGGTGAAGTTTGTCCCGTCCGAGGCGCCGCCGGGCTCGCGTCA
CGTGACCGGGGCGCGCCGCGGTTCGGGGCAGGACGGGTTCCGGGGTTCTGAGCTGGAGGGGATGGAGGCGACCTTGGAGC
AGCACCTGGAGGACACAATGAAGAATCCATCCATTGTCGGAGTCCTGTGCACAGACTCACAAGGACTTAATCTGGGCTGC
CGTGGGACGCTGTCAGATGAGCATGCTGGAGTGATATCTGTTCTAGCCCAGCAAGCAGCTAAGCTTACCTCTGACCCCAC
AGACATTCCTGTGGTGTGTCTAGAATCAGATAACGGGAACATTATGATCCAGAAACATGATGGCATTACAGTGGCAGTGC
ACAAAATGGCCTCCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011504 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000014970 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000003438 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000005672 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000021821 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000134248 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000016522 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000005264 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000007198 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000015023 | ortholog_one2many | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000003833 | ortholog_one2one | 5 retrogenes | |
| Mus musculus | ENSMUSG00000087260 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000002449 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000033478 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000001078 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000006807 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000003401 | ortholog_one2many | 5 retrogenes | |
| Tupaia belangeri | ENSTBEG00000009117 | ortholog_one2one | 5 retrogenes | |
| Tarsius syrichta | ENSTSYG00000006011 | ortholog_one2one | 5 retrogenes | |
| Tursiops truncatus | ENSTTRG00000001319 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_138 | 96.77 | 67.39 | Please wait, loading  |
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| 2. | retro_opri_199 | 58.90 | 51.45 | Please wait, loading |
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| 3. | retro_opri_488 | 58.90 | 51.45 | Please wait, loading |
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| 4. | retro_opri_567 | 96.77 | 67.39 | Please wait, loading |
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| 5. | retro_opri_716 | 98.92 | 67.39 | Please wait, loading |
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Download FASTA sequences of all ENSOPRG00000004283 retrocopies