Parental gene:

Tiprl, ENSRNOG00000003048

Aliases:Tiprl, RGD1310442
Description:TIP41-like protein [Source:UniProtKB/Swiss-Prot;Acc:A2VCX1]
Organism:Rat (Rattus norvegicus)
Coordinates:13:88358552..88384034(-)


>ENSRNOG00000003048
ATGATGATCCACGGCTTTCAGAGCAGCCACCAGGACTTCTCCTTCGGGCCTTGGAAGCTTACCGCGTCCAAGACCCACAT
CATGAAGTCTGCGGATGTGGAAAAGTTAGCCGACGAGCTGCATATGCCATCCCTCCCTGAAATGATGTTTGGAGACAACG
TTCTAAGGATCCAGCATGGTTCTGGCTTCGGAATAGAGTTCAATGCTACGGATGCCCTGAGATGTGTGAACAACTACCAG
GGCATGCTCAAAGTAGCCTGTGCTGAAGAGTGGCAGGAAAGTAGGACGGAGGGTGAACACTCCAAAGAAGTTATTAAACC
ATATGACTGGACCTATACAACAGATTATAAAGGAACGTTGCTTGGAGAATCTCTTAAGTTAAAGGTTGTACCTACAACAG
ATCATATAGATACAGAAAAATTGAAAGCCAGAGAGCAGATTAAATTTTTTGAAGAAGTTCTCCTGTTTGAAGATGAATTA
CATGATCATGGCGTTTCCAGCCTGAGTGTGAAAATTAGAGTAATGCCTTCCAGCTTTTTTCTGCTATTGCGGTTTTTCCT
GAGAATTGATGGGGTGCTCATCAGAATGAATGACACAAGGCTTTATCATGAGGCTGACAAGACCTACATGTTACGAGAAT
ATACATCCAGAGAGAGCAAAATTGCTAATTTAATGCATGTTCCACCTTCCCTCTTCACGGAACCTAATGAAATATCACAA
TATTTACCAATTAAGGAAGCAGTTTGTGAGAAGCTAGTATTTCCAGAAAGAATTGATCCTAACCCCGTGGACTCAGAAAG
TGCGCCCTCAGAATAA

Library Parental gene expression (RPM)
SRP017611_brain 20 .92 RPM
SRP017611_kidney 19 .33 RPM
SRP017611_liver 7 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008689 ortholog_one2one 3 retrogenes
retro_chof_1079, retro_chof_1094, retro_chof_1746,
Cavia porcellus ENSCPOG00000009945 ortholog_one2one 1 retrogene
retro_cpor_763,
Echinops telfairi ENSETEG00000005808 ortholog_one2one 1 retrogene
retro_etel_1273,
Microcebus murinus ENSMICG00000007808 ortholog_one2one 1 retrogene
retro_mmur_1335,
Myotis lucifugus ENSMLUG00000011927 ortholog_one2one 3 retrogenes
retro_mluc_607, retro_mluc_909, retro_mluc_941,
Monodelphis domestica ENSMODG00000002880 ortholog_one2many 1 retrogene
retro_mdom_180,
Mus musculus ENSMUSG00000040843 ortholog_one2one 1 retrogene
retro_mmus_2653,
Ochotona princeps ENSOPRG00000011313 ortholog_one2one 1 retrogene
retro_opri_885,
Pteropus vampyrus ENSPVAG00000005071 ortholog_one2one 1 retrogene
retro_pvam_257,
Sarcophilus harrisii ENSSHAG00000018932 ortholog_one2one 1 retrogene
retro_shar_771,
Ictidomys tridecemlineatus ENSSTOG00000014921 ortholog_one2one 1 retrogene
retro_itri_1756,
Tupaia belangeri ENSTBEG00000017081 ortholog_one2one 3 retrogenes
retro_tbel_1717, retro_tbel_2833, retro_tbel_3376,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2197 83.90 74.54
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Download FASTA sequences of all ENSRNOG00000003048 retrocopies