Parental gene:

Rab1, ENSRNOG00000004992

Aliases:None
Description:RAB1, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:97842]
Organism:Rat (Rattus norvegicus)
Coordinates:14:104208409..104236221(+)


>ENSRNOG00000004992
ATGAATCCCGAATATGATTATTTATTCAAGTTACTCCTGATTGGCGACTCTGGGGTTGGAAAGTCTTGCCTTCTCCTTAG
GTTTGCGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA
GGAAAAAGAAGAAGAAAAGAAAAGAAATGGCCAAGGAAGAAGATGACACGTATACGGAAAGCTACATCAGCACGATTGGT
GTGGATTTCAAGATACGGACTATAGAGCTAGACGGGAAAACAATCAAGCTTCAGATATGGGACACAGCAGGCCAGGAAAG
ATTTCGAACAATCACCTCCAGTTATTACAGAGGAGCCCATGGCATCATAGTTGTGTATGATGTGACAGACCAGGAGTCCT
TCAATAACGTGAAACAGTGGCTGCAGGAGATCGATCGCTACGCCAGCGAAAATGTCAACAAGTTGTTGGTAGGGAACAAA
TGTGACCTGACCACAAAGAAAGTAGTAGACTACACAACAGCCAAGGAATTTGCAGATTCCCTTGGAATTCCATTTTTGGA
AACCAGTGCTAAGAACGCAACGAATGTAGAACAGTCTTTCATGACCATGGCAGCGGAGATTAAAAAGCGGATGGGTCCTG
GAGCAACAGCTGGAGGTGCGGAGAAGTCCAATGTTAAAATCCAGAGCACTCCAGTCAAGCAGTCAGACTTCACCAACCTC
ACTGGTTCAAGGAACTCAAACTCTGTGGACTGTGTGCTTCTTAGCGCTTCATCTCCAGCCCAGACCATCCGAAGTGGCCT
CACCAGCAGCACTTGTCATGCATGTGTGGTCGAGATGGAGCACAGCACATGCTTCCTCATAGGCAGTGATCTGGTGTCAC
CTTTATTCTTCTCAACTGTATAA

Library Parental gene expression (RPM)
SRP017611_brain 100 .65 RPM
SRP017611_kidney 155 .41 RPM
SRP017611_liver 68 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000002112 ortholog_one2one 1 retrogene
retro_dord_305,
Echinops telfairi ENSETEG00000002205 ortholog_one2one 2 retrogenes
retro_etel_1687, retro_etel_413,
Homo sapiens ENSG00000138069 ortholog_one2one 2 retrogenes
retro_hsap_2362, retro_hsap_3626,
Macaca mulatta ENSMMUG00000021721 ortholog_one2many 1 retrogene
retro_mmul_951,
Oryctolagus cuniculus ENSOCUG00000017003 ortholog_one2one 1 retrogene
retro_ocun_800,
Pongo abelii ENSPPYG00000012360 ortholog_one2one 1 retrogene
retro_pabe_2135,
Pan troglodytes ENSPTRG00000011989 ortholog_one2one 1 retrogene
retro_ptro_1727,
Rattus norvegicus ENSRNOG00000019295 other_paralog 1 retrogene
retro_rnor_455,
Ictidomys tridecemlineatus ENSSTOG00000020693 ortholog_one2one 1 retrogene
retro_itri_1541,
Drosophila melanogaster FBgn0016700 ortholog_one2many 1 retrogene
retro_dmel_36,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_110 91.07 56.00
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Download FASTA sequences of all ENSRNOG00000004992 retrocopies