Parental gene:

Utp11l, ENSRNOG00000007174

Aliases:Utp11l, Cgi-94, Cgi94, RGD1559610
Description:probable U3 small nucleolar RNA-associated protein 11 [Source:RefSeq peptide;Acc:NP_001101448]
Organism:Rat (Rattus norvegicus)
Coordinates:5:146437399..146452289(-)


>ENSRNOG00000007174
ATGTCGGCGGCTTTTCGCAAGGCAGCCAAGACCCGGCAGCGGGAACACCGAGAACGAAGCCAGCCTGGCTTTCGGAAACG
CCTGGGTTTGCTAGAGAAAAAGAAAGATTACAAACTCCGTGCAAATGACTATCATAAAAAACAAGATTTCCTCAGAGCTC
TCCGGAAGAAGGCTCTTGAAAAAAATCCAGATGAATTCTACTATAAAATGACTCGGGCCAAGCTCCAGGACGGAGTTCAT
ATTTTCAAAGACAACAAGGAAGAAGTGACAGCAGAGCAGCTAAAACTGATGAGAACTCAGGACATCAAGTACATAGAGAT
GAAGAGGGTGGCGGAGGCGAAGAAAATTGAAAGACTGAAATCAGAGCTCCACCTGCTGGATGTCCAGGGGAAGCAACAGA
ATAAGCACGTGTTCTTTTTTGACACCAAAAAGGAAGTTGAACAGTTTGATGTTGCGACTCACTTGCAGACGGCCCCAGAA
CTACTCGATAGGGTCTATAATAGACCCAGAATAGAGACCTTGCAGAAGGAGAGAGTGAAAGGAGTTACCCCTCAGACTCG
CCTCAAGCGGATAGCCAAAGAACGACAAAAGCAGTATGACTGCTTGACACAGCGCATCGAGCGGGAGAAGCAGCTGTTTG
TTGTTGCCCAGAAAATCCAGACACGCAAAGACCTCATGGATAAAACTCAGAAGGTGAAGGTGAAGAAAGAAACAGTAAAC
TCCCCAGCGATATACAGATTCCAGACTCGCCGGAAACGTTGA

Library Parental gene expression (RPM)
SRP017611_brain 16 .90 RPM
SRP017611_kidney 19 .75 RPM
SRP017611_liver 10 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000001043 ortholog_one2one 1 retrogene
retro_cpor_1084,
Microcebus murinus ENSMICG00000001496 ortholog_one2one 1 retrogene
retro_mmur_894,
Myotis lucifugus ENSMLUG00000001003 ortholog_one2one 1 retrogene
retro_mluc_2386,
Mus musculus ENSMUSG00000028907 ortholog_one2one 1 retrogene
retro_mmus_1968,
Oryctolagus cuniculus ENSOCUG00000007154 ortholog_one2one 2 retrogenes
retro_ocun_1285, retro_ocun_669,
Otolemur garnettii ENSOGAG00000016492 ortholog_one2one 2 retrogenes
retro_ogar_3229, retro_ogar_3324,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1838 68.67 57.31
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Download FASTA sequences of all ENSRNOG00000007174 retrocopies