Parental gene:

HNRNPA3, ENSSHAG00000018255

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:24941]
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL849635.1:3391898..3399577(+)


>ENSSHAG00000018255
CCACGCCTGGCCCCTCCCCCTCACGTCCGCCTTCCCACCAGCCGCCGGCGGCGCGCGGTAAGTGCGTCACGTGCCGGTCA
TGATCCAAAGGAACCAGAGCAGTTGAGAAAACTGTTTATTGGTGGCTTGAGCTTTGAAACTACGGATGATAGTTTAAGAG
AACACTTTGAAAAATGGGGCACTCTCACAGATTGTGTGGTGATGAGAGATCCTCAAACAAAACGTTCCAGAGGCTTTGGC
TTTGTGACTTATTCTTGTGTAGAAGAGGTAGATGCAGCAATGTGTGCTCGACCACATAAGGTTGATGGGCGTGTAGTGGA
ACCAAAGAGAGCTGTTTCTAGAGAGGATTCTGTAAAACCTGGTGCACATCTAACCGTGAAGAAAATTTTTGTTGGTGGTA
TTAAAGAAGATACAGAAGAATATAATTTAAGAGACTACTTTGAAAAGTATGGCAAGATCGAAACTATAGAAGTTATGGAA
GATCGACAGAGTGGAAAGAAGAGAGGATTTGCTTTTGTAACTTTTGATGATCATGATACAGTTGACAAAATTGTTGTTCA
GAAATATCATACTATAAATGGGCATAACTGTGAAGTGAAAAAGGCCCTTTCGAAGCAAGAGATGCAGTCTGCTGGCTCAC
AAAGAGGTCGTGGAGGTGGCTCAGGCAATTTTATGGGTCGAGGAGGAAATTTTGGAGGTGGTGGAGGAAACTTTGGCCGT
GGAGGAAACTTTGGTGGAAGAGGTGGATATGGTGGTGGTGGTGGTGGTAGCAGAGGCAGTTATGGAGGTGGAGATGGTGG
CTATAATGGATTTGGTGGAGATGGTGGCAACTATGGAGGTGGTCCTGGCTACAGTAGTAGAGGGGGTTATGGTGGTGGTG
GTGGACCTGGATACGGAAACCAAGGTGGTGGATATGGTGGTGGTGGTGGAGGAGGATATGATGGTTACAATGAAGGAGGA
AATTTTGGTGGT

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011920 possible_ortholog 4 retrogenes
retro_amel_1407, retro_amel_557, retro_amel_715, retro_amel_765,
Bos taurus ENSBTAG00000021580 possible_ortholog 8 retrogenes
retro_btau_1029, retro_btau_1310, retro_btau_1587, retro_btau_212, retro_btau_277, retro_btau_370, retro_btau_811, retro_btau_90,
Cavia porcellus ENSCPOG00000004251 possible_ortholog 3 retrogenes
retro_cpor_1516, retro_cpor_1543, retro_cpor_65,
Felis catus ENSFCAG00000012146 possible_ortholog 5 retrogenes
retro_fcat_1231, retro_fcat_572, retro_fcat_662, retro_fcat_677, retro_fcat_842,
Gorilla gorilla ENSGGOG00000006130 possible_ortholog 6 retrogenes
retro_ggor_1001, retro_ggor_1197, retro_ggor_14, retro_ggor_1736, retro_ggor_576, retro_ggor_702,
Macaca mulatta ENSMMUG00000001858 possible_ortholog 4 retrogenes
retro_mmul_1945, retro_mmul_2442, retro_mmul_386, retro_mmul_801,
Monodelphis domestica ENSMODG00000019803 possible_ortholog 1 retrogene
retro_mdom_1590,
Mustela putorius furo ENSMPUG00000014103 possible_ortholog 6 retrogenes
retro_mputfur_1141, retro_mputfur_1336, retro_mputfur_1545, retro_mputfur_603, retro_mputfur_674, retro_mputfur_779,
Mus musculus ENSMUSG00000059005 possible_ortholog 6 retrogenes
retro_mmus_133, retro_mmus_1359, retro_mmus_1409, retro_mmus_210, retro_mmus_3635, retro_mmus_60,
Oryctolagus cuniculus ENSOCUG00000002743 ortholog_one2many 2 retrogenes
retro_ocun_994, retro_ocun_995,
Otolemur garnettii ENSOGAG00000025948 possible_ortholog 3 retrogenes
retro_ogar_1685, retro_ogar_3010, retro_ogar_3175,
Otolemur garnettii ENSOGAG00000028132 possible_ortholog 7 retrogenes
retro_ogar_1869, retro_ogar_1924, retro_ogar_2222, retro_ogar_2590, retro_ogar_3215, retro_ogar_600, retro_ogar_814,
Pongo abelii ENSPPYG00000012967 possible_ortholog 1 retrogene
retro_pabe_450,
Pan troglodytes ENSPTRG00000012676 possible_ortholog 5 retrogenes
retro_ptro_1059, retro_ptro_2430, retro_ptro_2966, retro_ptro_683, retro_ptro_872,
Rattus norvegicus ENSRNOG00000001556 possible_ortholog 11 retrogenes
retro_rnor_1510, retro_rnor_1665, retro_rnor_1869, retro_rnor_2053, retro_rnor_2659, retro_rnor_2669, retro_rnor_2713, retro_rnor_2776, retro_rnor_2809, retro_rnor_348, retro_rnor_959,
Sarcophilus harrisii ENSSHAG00000013312 other_paralog 1 retrogene
retro_shar_752,
Sarcophilus harrisii ENSSHAG00000013616 other_paralog 3 retrogenes
retro_shar_297, retro_shar_527, retro_shar_625,
Ictidomys tridecemlineatus ENSSTOG00000025125 possible_ortholog 4 retrogenes
retro_itri_1444, retro_itri_1878, retro_itri_952, retro_itri_98,
Tursiops truncatus ENSTTRG00000014225 possible_ortholog 3 retrogenes
retro_ttru_1459, retro_ttru_675, retro_ttru_9,
Xenopus tropicalis ENSXETG00000001806 ortholog_one2one 1 retrogene
retro_xtro_11,
Xiphophorus maculatus ENSXMAG00000000439 ortholog_one2one 1 retrogene
retro_xmac_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_518 60.11 57.10
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Download FASTA sequences of all ENSSHAG00000018255 retrocopies