Parental gene:

HMGN3, ENSTSYG00000005238

Aliases:None
Description:high mobility group nucleosomal binding domain 3 [Source:HGNC Symbol;Acc:12312]
Organism:Tarsier (Tarsius syrichta)
Coordinates:scaffold_5808:7011..17062(-)


>ENSTSYG00000005238
TCGCCAGAGAATCCAGAGGGCAAAGATGGATCCAAAGTAACTAAACAGGAGCCCACAAGACGGTCTGCCAGATTGTCAGC
GAAACTTGACCCACCAAAACCTGAACCTAAACCACGAAAAATATCTGCTAAGAAAGAACCCGAAGCAAAGATTAACCGAG
CTGCTAAAGGGAAGAAGGAGGAAAAACTGGAAGCTGGAAAGGAAGGTACTGCACCATCTGAAAATGGTGAAACCAGAGCT
GGAGAGGCACAGAAAACTGAATCTGTAGATATTGAGGGAGAATGA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007015 ortholog_one2one 1 retrogene
retro_chof_2241,
Cavia porcellus ENSCPOG00000012407 ortholog_one2one 2 retrogenes
retro_cpor_1399, retro_cpor_147,
Felis catus ENSFCAG00000028793 ortholog_one2one 1 retrogene
retro_fcat_1400,
Homo sapiens ENSG00000118418 ortholog_one2one 1 retrogene
retro_hsap_231,
Gorilla gorilla ENSGGOG00000006910 ortholog_one2one 1 retrogene
retro_ggor_293,
Macaca mulatta ENSMMUG00000004351 ortholog_one2one 1 retrogene
retro_mmul_414,
Nomascus leucogenys ENSNLEG00000012377 ortholog_one2one 2 retrogenes
retro_nleu_68, retro_nleu_851,
Otolemur garnettii ENSOGAG00000016487 possible_ortholog 1 retrogene
retro_ogar_190,
Ochotona princeps ENSOPRG00000009611 ortholog_one2one 1 retrogene
retro_opri_799,
Pan troglodytes ENSPTRG00000018366 ortholog_one2one 2 retrogenes
retro_ptro_1427, retro_ptro_200,
Ictidomys tridecemlineatus ENSSTOG00000014353 ortholog_one2one 1 retrogene
retro_itri_251,
Tupaia belangeri ENSTBEG00000015468 ortholog_one2one 3 retrogenes
retro_tbel_1912, retro_tbel_4714, retro_tbel_615,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_268 82.09 71.28
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_tsyr_976 90.43 100.00
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_tsyr_1569 70.42 74.47
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSTSYG00000005238 retrocopies