Parental gene:

SNRPG, ENSVPAG00000007452

Aliases:None
Description:small nuclear ribonucleoprotein polypeptide G [Source:HGNC Symbol;Acc:11163]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_982:96647..105916(-)


>ENSVPAG00000007452
ATGAGCAAAGCTCACCCTCCCGAGTTGAAGAAATTTATGGACAAGAAGTTATCATTGAAATTAAATGGTGGCAGACATGT
CCAAGGAATACTGCGAGGATTTGACCCCTTTATGAATCTTGTGATAGATGAATGTGTGGAGATGGCAACTAGTGGGCAAC
AGAACAACATTGGAATGGTGGTAATACGAGGAAACAGCATCATCATGTTAGAAGCCTTGGAACGAGTATGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016000 possible_ortholog 9 retrogenes
retro_amel_1577, retro_amel_1618, retro_amel_1671, retro_amel_1795, retro_amel_186, retro_amel_466, retro_amel_563, retro_amel_747, retro_amel_944,
Choloepus hoffmanni ENSCHOG00000000130 possible_ortholog 3 retrogenes
retro_chof_2006, retro_chof_214, retro_chof_284,
Callithrix jacchus ENSCJAG00000019313 possible_ortholog 18 retrogenes
retro_cjac_1034, retro_cjac_1227, retro_cjac_1398, retro_cjac_149, retro_cjac_1897, retro_cjac_223, retro_cjac_2419, retro_cjac_2431, retro_cjac_2658, retro_cjac_2795, retro_cjac_3246, retro_cjac_3314, retro_cjac_4078, retro_cjac_547, retro_cjac_763, retro_cjac_796, retro_cjac_897, retro_cjac_998,
Dasypus novemcinctus ENSDNOG00000019446 possible_ortholog 18 retrogenes
retro_dnov_1104, retro_dnov_1138, retro_dnov_1150, retro_dnov_1207, retro_dnov_1232, retro_dnov_1297, retro_dnov_221, retro_dnov_2273, retro_dnov_2295, retro_dnov_249, retro_dnov_269, retro_dnov_272, retro_dnov_435, retro_dnov_518, retro_dnov_520, retro_dnov_564, retro_dnov_647, retro_dnov_883,
Dipodomys ordii ENSDORG00000005623 possible_ortholog 2 retrogenes
retro_dord_253, retro_dord_483,
Echinops telfairi ENSETEG00000010028 possible_ortholog 12 retrogenes
retro_etel_1019, retro_etel_131, retro_etel_1519, retro_etel_1999, retro_etel_2026, retro_etel_329, retro_etel_363, retro_etel_407, retro_etel_428, retro_etel_520, retro_etel_648, retro_etel_739,
Felis catus ENSFCAG00000008118 ortholog_one2one 8 retrogenes
retro_fcat_1006, retro_fcat_1092, retro_fcat_1248, retro_fcat_1467, retro_fcat_1893, retro_fcat_562, retro_fcat_82, retro_fcat_90,
Gorilla gorilla ENSGGOG00000022169 possible_ortholog 3 retrogenes
retro_ggor_1413, retro_ggor_1672, retro_ggor_664,
Loxodonta africana ENSLAFG00000002301 ortholog_one2many 3 retrogenes
retro_lafr_428, retro_lafr_559, retro_lafr_887,
Myotis lucifugus ENSMLUG00000026490 possible_ortholog 3 retrogenes
retro_mluc_273, retro_mluc_46, retro_mluc_731,
Macaca mulatta ENSMMUG00000007961 possible_ortholog 3 retrogenes
retro_mmul_1021, retro_mmul_2048, retro_mmul_300,
Monodelphis domestica ENSMODG00000011528 ortholog_one2many 1 retrogene
retro_mdom_1945,
Oryctolagus cuniculus ENSOCUG00000011214 possible_ortholog 2 retrogenes
retro_ocun_1032, retro_ocun_57,
Ochotona princeps ENSOPRG00000001093 possible_ortholog 6 retrogenes
retro_opri_290, retro_opri_330, retro_opri_596, retro_opri_599, retro_opri_757, retro_opri_823,
Rattus norvegicus ENSRNOG00000016507 possible_ortholog 1 retrogene
retro_rnor_409,
Sus scrofa ENSSSCG00000024776 possible_ortholog 1 retrogene
retro_sscr_907,
Ictidomys tridecemlineatus ENSSTOG00000008654 possible_ortholog 11 retrogenes
retro_itri_1116, retro_itri_1260, retro_itri_128, retro_itri_1395, retro_itri_1871, retro_itri_280, retro_itri_353, retro_itri_572, retro_itri_589, retro_itri_910, retro_itri_947,
Tupaia belangeri ENSTBEG00000017381 possible_ortholog 66 retrogenes
retro_tbel_1010, retro_tbel_1076, retro_tbel_1114, retro_tbel_1133, retro_tbel_1161, retro_tbel_1164, retro_tbel_1174, retro_tbel_121, retro_tbel_1288, retro_tbel_1448, retro_tbel_1461, retro_tbel_147, retro_tbel_1478, retro_tbel_149, retro_tbel_164, retro_tbel_1654, retro_tbel_1887, retro_tbel_1939, retro_tbel_1944, retro_tbel_1965, retro_tbel_1966, retro_tbel_1997, retro_tbel_2001, retro_tbel_2143, retro_tbel_217, retro_tbel_236, retro_tbel_239, retro_tbel_241, retro_tbel_2454, retro_tbel_2462, retro_tbel_2572, retro_tbel_2664, retro_tbel_2941, retro_tbel_3098, retro_tbel_3379, retro_tbel_3385, retro_tbel_343, retro_tbel_347, retro_tbel_3495, retro_tbel_3559, retro_tbel_3603, retro_tbel_362, retro_tbel_3699, retro_tbel_3980, retro_tbel_3981, retro_tbel_3983, retro_tbel_4010, retro_tbel_4011, retro_tbel_4177, retro_tbel_4196, retro_tbel_43, retro_tbel_4399, retro_tbel_4442, retro_tbel_4505, retro_tbel_4549, retro_tbel_4609, retro_tbel_465, retro_tbel_489, retro_tbel_697, retro_tbel_726, retro_tbel_736, retro_tbel_805, retro_tbel_921, retro_tbel_93, retro_tbel_936, retro_tbel_947,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_25 83.12 100.00
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2. retro_vpac_42 75.32 100.00
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3. retro_vpac_59 71.43 100.00
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4. retro_vpac_182 60.53 97.37
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5. retro_vpac_196 78.95 97.37
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6. retro_vpac_290 82.89 100.00
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7. retro_vpac_295 70.83 92.11
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8. retro_vpac_352 55.88 88.16
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9. retro_vpac_591 68.57 92.11
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10. retro_vpac_641 75.00 89.47
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Download FASTA sequences of all ENSVPAG00000007452 retrocopies