Parental gene:

ONIVA01G37420

Aliases:None
Description:None
Organism:Indian wild rice (Oryza nivara)
Coordinates:1:32099877..32103355(-)


>ONIVA01G37420
ATGGATCGGGTTCGCGGATGCGCGTTCCTGCTCGGCGTCCTGCTCGCAGGATCCCTGTTTGCATTTTCTGTTGCGAAGGA
GGAGACCAAGAAGCTCGGTACCGTGATCGGTATTGATCTTGGTACAACCTACTCGTGTGTCGGTGTGTACAAGAATGGTC
ATGTCGAGATTATCGCCAATGACCAGGGTAACCGTATCACACCCTCATGGGTTGCATTCACCGATAGCGAGAGGCTCATC
GGTGAGGCTGCCAAGAACCAGGCAGCTGTGAACCCAGAGAGGACCATCTTCGATGTCAAACGTCTCATTGGAAGAAAGTT
TGAAGACAAGGAAGTTCAGAGGGACATGAAACTTGTCCCCTACAAGATTGTGAACAAGGACGGTAAGCCCTACATTCAGG
TCAAGATCAAGGATGGAGAGAACAAGGTCTTCAGCCCTGAGGAGGTCAGTGCTATGATCCTTGGAAAGATGAAGGAGACT
GCTGAGGCATACCTTGGCAAGAAGATCAACGATGCTGTCGTGACTGTTCCTGCGTACTTCAATGACGCGCAGAGGCAGGC
AACCAAGGATGCCGGTGTCATTGCTGGCCTGAATGTTGCTAGGATCATCAATGAGCCAACTGCTGCTGCTATTGCGTACG
GTTTGGACAAGAAGGGTGGTGAGAAGAACATCCTTGTCTTTGACCTTGGTGGTGGGACATTCGATGTCAGTATCTTGACC
ATTGACAACGGTGTGTTTGAGGTGTTGGCCACCAATGGTGACACTCATCTTGGAGGTGAGGACTTTGACCAGAGAATCAT
GGAGTACTTCATCAAGTTGATCAAGAAGAAGTACAGCAAGGACATCAGCAAGGACAACCGTGCTCTTGGAAAGCTGAGGA
GGGAAGCTGAGCGTGCCAAGAGGGCCCTCAGCAACCAGCACCAGGTCCGTGTTGAGATTGAGTCCCTCTTTGACGGGACC
GATTTCTCGGAGCCGCTGACCCGTGCCAGATTTGAGGAGTTGAACAATGATCTGTTCCGCAAGACCATGGGACCTGTCAA
GAAGGCTATGGACGATGCTGGCCTTGAGAAGAGCCAGATTCACGAGATTGTTCTTGTCGGTGGTAGCACCAGGATTCCCA
AGGTTCAGCAGCTCCTCAGAGACTACTTCGAGGGCAAGGAGCCCAACAAGGGTGTCAACCCTGATGAGGCTGTTGCCTAT
GGTGCTGCGGTTCAGGGAAGCATTCTCAGCGGCGAGGGCGGTGACGAAACCAAAGATATCCTTCTCCTGGATGTGGCACC
CCTTACCCTCGGTATCGAGACTGTCGGTGGAGTCATGACCAAGTTGATCCCCAGGAACACCGTCATCCCCACCAAGAAGT
CCCAGGTGTTCACCACCTACCAGGATCAGCAGACAACCGTCTCCATCCAGGTCTTTGAGGGTGAGCGCAGCATGACCAAG
GACTGCCGTCTTCTCGGCAAGTTCGACCTCTCTGGCATTCCAGCAGCACCAAGGGGCACCCCCCAGATTGAGGTGACCTT
CGAGGTGGACGCCAACGGCATCCTGAACGTGAAGGCTGAGGACAAGGGCACCGGCAAGTCAGAGAAGATCACGATCACGA
ACGAGAAGGGGCGCCTGAGCCAGGAGGAGATCGACCGGATGGTGCGCGAGGCGGAGGAGTTTGCGGAGGAGGACAAGAAG
GTGAAGGAGCGGATCGACGCCCGCAACCAGCTCGAGACCTACGTGTACAACATGAAGAACACCGTCGGCGACAAGGACAA
GCTGGCGGACAAGCTGGAGAGCGAGGAGAAGGAGAAGGTGGAGGAGGCCCTCAAGGAGGCCCTCGAGTGGCTGGACGAGA
ACCAGACCGCCGAGAAGGAGGAGTACGAGGAGAAGCTCAAGGAGGTCGAGGCCGTCTGCAACCCCATCATCTCCGCCGTC
TACCAGAGGACCGGTGGCGCCCCGGGTGGTGGCGCCGACGGCGAGGGCGGCGTCGACGACGAGCATGACGAGCTGTAG

Species Parental gene accession Homology type Retrogenes number
Brachypodium distachyon BRADI3G01477 ortholog_one2one 1 retrogene
retro_bdis_30,
Aegilops tauschii F775_27431 ortholog_one2one 1 retrogene
retro_atau_11,
Oryza longistaminata KN538684.1_FG046 ortholog_one2one 1 retrogene
retro_olon_13,
Hordeum vulgare MLOC_55999 ortholog_one2one 1 retrogene
retro_hvul_1,
Oryza rufipogon ORUFI02G01160 ortholog_one2one 1 retrogene
retro_oruf_18,
Sorghum bicolor Sb04g001140 ortholog_one2one 1 retrogene
retro_sbic_39,
Triticum aestivum Traes_6DS_A593093E1 ortholog_one2one 1 retrogene
retro_taes_72,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oniv_8 69.92 95.19
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Download FASTA sequences of all ONIVA01G37420 retrocopies