| EST name | EST sequence |
| gi|112339926|gb|AM300344.1|AM300344 | GCAGTGATGGCGCTTTGTTACGAGACGACAGACACCCCCGCGGCATGCTAAATGAACGTTATACGCGTTTGATTAACTGC CAACCCCCCCGGAGCAAAGTTCATTTCCCCTGAGCTCGTGTTTTTTGCCCTCTCCCCTCTCGAGGCCGCTGTCAGCCCTG TTGTTTAGTTTTATTGTTGAACCCGTGTAACTAGCCTGCTAGTTAGCAAGTAGGCTAAGCTTTCCCCTATGTCCTCTACA GAAAGCTTCAGTTCAGCTGTCACCGATTGGCTTTTTATCAATTCCTGGTGGATCCTGCTTCCTTTTATTATGCTCCTTAT AGTGGTCGCCTTCATCGTTGCCTTTGTGTTGCTGCTTTACATGATATCGCCGCTCATCAGTCCGAAGCCTCTGAAATTAA ACGGGGCCCACGTCGTGGTGACCGGAGGCTCAGGTGGAATTGGGAAATGCATTGCGATCGAATGCTACAGACAAGGAGCC TTTATCACTCTGGTGGCTCGTGATGAGGATAAGTTACTCCGAGCAAAGAAAGAGGTGGAAAAATTTGCCATCAATGACAA ACAGGTGGTGCTCTGTGTATCGGTCGACGTCTCCAGTGATTACACTCAAGTGGAAAATGTGATAAAGCAGGCTCAGGAGA AGCTTGGACCGGTGGACATGCTGGTGAACTGCGCTGGAACAGCCGTCGCTGGGAAGTTCGAGGAGATGGAAGTGGAACGT TTCAAAGAGTTAATGGAGCTGAATTACCTGGGCAGCGTCTACCCAACACGAGCCGTCATAACCACCATGAAGGAGCGAAG AATGGGTCGAATCGTGTTCGTGTCGTCCC |
Most similar to sp|Q6GV12|KDSR_MOUSE
>BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q8L5Y6|CAND1_ARATH Cullin-associated NEDD8-dissociated protein 1
OS=Arabidopsis thaliana GN=CAND1 PE=1 SV=1
Length = 1219
Score = 193 bits (491), Expect(2) = 3e-51
Identities = 104/172 (60%), Positives = 126/172 (73%)
Frame = -1
Query: 957 ITPLLNNQNVLKQKFIRTVDXXXXXXXXXXXLETKKAALECVDTLLDSCLDQLNPSSLMV 778
+ PLL +Q V+K++ IRTVD LE +KAA ECV TL+DSCLDQ+NPSS +V
Sbjct: 1048 LLPLLYDQTVIKKELIRTVDLGPFKHVVDDGLELRKAAFECVFTLVDSCLDQVNPSSFIV 1107
Query: 777 PFL*SGLGDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVEPLEKTIVHRPKGDPVNQEI 598
PFL SGL DHYD+KM CHLILS LADKCPSAVLAVLDSLVEPL KTI +PK D V QE
Sbjct: 1108 PFLKSGLEDHYDLKMLCHLILSLLADKCPSAVLAVLDSLVEPLHKTISFKPKQDAVKQEH 1167
Query: 597 DPNENMIPSAFGAIPALNRISGRDYSMKFKNLMNKITATPSLAEKYKSVPSE 442
D NE+MI SA AI +L+RI+G DYS KFK LM + + L EK++++ +E
Sbjct: 1168 DRNEDMIRSALRAISSLDRINGVDYSHKFKGLMGDMKRSVPLWEKFQTIRNE 1219
Score = 30.8 bits (68), Expect(2) = 3e-51
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -2
Query: 1079 EISNLPKAKKKHYRNLKRPTFPGLKNPAHKQPNLIKGFLPK 957
+IS+ K R+++R L AH +PNLIKG LP+
Sbjct: 1007 QISSFLMLIKDGDRHVRRAAVSALSTFAHYKPNLIKGLLPE 1047
>sp|P97536|CAND1_RAT Cullin-associated NEDD8-dissociated protein 1
Length = 1230
Score = 103 bits (258), Expect(2) = 2e-21
Identities = 62/172 (36%), Positives = 95/172 (55%)
Frame = -1
Query: 957 ITPLLNNQNVLKQKFIRTVDXXXXXXXXXXXLETKKAALECVDTLLDSCLDQLNPSSLMV 778
+ P L N+ ++++ IR V+ L+ +KAA EC+ TLLDSCLD+L+ +
Sbjct: 1048 VLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFL- 1106
Query: 777 PFL*SGLGDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVEPLEKTIVHRPKGDPVNQEI 598
+ GL DHYD+KM L+L +L+ CPSAVL LD LVEPL T + K + V QE
Sbjct: 1107 NHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEF 1166
Query: 597 DPNENMIPSAFGAIPALNRISGRDYSMKFKNLMNKITATPSLAEKYKSVPSE 442
+ + + SA A+ AL I + S ++I++ P LA ++S+ +
Sbjct: 1167 EKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAAIFESIQKD 1218
Score = 20.8 bits (42), Expect(2) = 2e-21
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -2
Query: 1037 NLKRPTFPGLKNPAHKQPNLIKGFL 963
N++R + AH +P+LI+ L
Sbjct: 1021 NVRRVALVTFNSAAHNKPSLIRDLL 1045
>sp|Q5R6L5|CAND1_PONAB Cullin-associated NEDD8-dissociated protein 1
OS=Pongo abelii GN=CAND1 PE=2 SV=1
Length = 1230
Score = 103 bits (258), Expect(2) = 2e-21
Identities = 62/172 (36%), Positives = 95/172 (55%)
Frame = -1
Query: 957 ITPLLNNQNVLKQKFIRTVDXXXXXXXXXXXLETKKAALECVDTLLDSCLDQLNPSSLMV 778
+ P L N+ ++++ IR V+ L+ +KAA EC+ TLLDSCLD+L+ +
Sbjct: 1048 VLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFL- 1106
Query: 777 PFL*SGLGDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVEPLEKTIVHRPKGDPVNQEI 598
+ GL DHYD+KM L+L +L+ CPSAVL LD LVEPL T + K + V QE
Sbjct: 1107 NHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEF 1166
Query: 597 DPNENMIPSAFGAIPALNRISGRDYSMKFKNLMNKITATPSLAEKYKSVPSE 442
+ + + SA A+ AL I + S ++I++ P LA ++S+ +
Sbjct: 1167 EKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAAIFESIQKD 1218
Score = 20.8 bits (42), Expect(2) = 2e-21
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -2
Query: 1037 NLKRPTFPGLKNPAHKQPNLIKGFL 963
N++R + AH +P+LI+ L
Sbjct: 1021 NVRRVALVTFNSAAHNKPSLIRDLL 1045
>sp|Q6ZQ38|CAND1_MOUSE Cullin-associated NEDD8-dissociated protein 1
OS=Mus musculus GN=Cand1 PE=2 SV=2
Length = 1230
Score = 103 bits (258), Expect(2) = 2e-21
Identities = 62/172 (36%), Positives = 95/172 (55%)
Frame = -1
Query: 957 ITPLLNNQNVLKQKFIRTVDXXXXXXXXXXXLETKKAALECVDTLLDSCLDQLNPSSLMV 778
+ P L N+ ++++ IR V+ L+ +KAA EC+ TLLDSCLD+L+ +
Sbjct: 1048 VLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFL- 1106
Query: 777 PFL*SGLGDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVEPLEKTIVHRPKGDPVNQEI 598
+ GL DHYD+KM L+L +L+ CPSAVL LD LVEPL T + K + V QE
Sbjct: 1107 NHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEF 1166
Query: 597 DPNENMIPSAFGAIPALNRISGRDYSMKFKNLMNKITATPSLAEKYKSVPSE 442
+ + + SA A+ AL I + S ++I++ P LA ++S+ +
Sbjct: 1167 EKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAAIFESIQKD 1218
Score = 20.8 bits (42), Expect(2) = 2e-21
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -2
Query: 1037 NLKRPTFPGLKNPAHKQPNLIKGFL 963
N++R + AH +P+LI+ L
Sbjct: 1021 NVRRVALVTFNSAAHNKPSLIRDLL 1045
>sp|Q86VP6|CAND1_HUMAN Cullin-associated NEDD8-dissociated protein 1
OS=Homo sapiens GN=CAND1 PE=1 SV=2
Length = 1230
Score = 103 bits (258), Expect(2) = 2e-21
Identities = 62/172 (36%), Positives = 95/172 (55%)
Frame = -1
Query: 957 ITPLLNNQNVLKQKFIRTVDXXXXXXXXXXXLETKKAALECVDTLLDSCLDQLNPSSLMV 778
+ P L N+ ++++ IR V+ L+ +KAA EC+ TLLDSCLD+L+ +
Sbjct: 1048 VLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFL- 1106
Query: 777 PFL*SGLGDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVEPLEKTIVHRPKGDPVNQEI 598
+ GL DHYD+KM L+L +L+ CPSAVL LD LVEPL T + K + V QE
Sbjct: 1107 NHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEF 1166
Query: 597 DPNENMIPSAFGAIPALNRISGRDYSMKFKNLMNKITATPSLAEKYKSVPSE 442
+ + + SA A+ AL I + S ++I++ P LA ++S+ +
Sbjct: 1167 EKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAAIFESIQKD 1218
Score = 20.8 bits (42), Expect(2) = 2e-21
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -2
Query: 1037 NLKRPTFPGLKNPAHKQPNLIKGFL 963
N++R + AH +P+LI+ L
Sbjct: 1021 NVRRVALVTFNSAAHNKPSLIRDLL 1045
>sp|A7MBJ5|CAND1_BOVIN Cullin-associated NEDD8-dissociated protein 1
OS=Bos taurus GN=CAND1 PE=2 SV=1
Length = 1230
Score = 103 bits (258), Expect(2) = 2e-21
Identities = 62/172 (36%), Positives = 95/172 (55%)
Frame = -1
Query: 957 ITPLLNNQNVLKQKFIRTVDXXXXXXXXXXXLETKKAALECVDTLLDSCLDQLNPSSLMV 778
+ P L N+ ++++ IR V+ L+ +KAA EC+ TLLDSCLD+L+ +
Sbjct: 1048 VLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFL- 1106
Query: 777 PFL*SGLGDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVEPLEKTIVHRPKGDPVNQEI 598
+ GL DHYD+KM L+L +L+ CPSAVL LD LVEPL T + K + V QE
Sbjct: 1107 NHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEF 1166
Query: 597 DPNENMIPSAFGAIPALNRISGRDYSMKFKNLMNKITATPSLAEKYKSVPSE 442
+ + + SA A+ AL I + S ++I++ P LA ++S+ +
Sbjct: 1167 EKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAAIFESIQKD 1218
Score = 20.8 bits (42), Expect(2) = 2e-21
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -2
Query: 1037 NLKRPTFPGLKNPAHKQPNLIKGFL 963
N++R + AH +P+LI+ L
Sbjct: 1021 NVRRVALVTFNSAAHNKPSLIRDLL 1045
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q6GV12|KDSR_MOUSE 3-ketodihydrosphingosine reductase OS=Mus
musculus GN=Kdsr PE=2 SV=1
Length = 332
Score = 254 bits (648), Expect = 7e-67
Identities = 125/157 (79%), Positives = 141/157 (89%)
Frame = +1
Query: 358 YMISPLISPKPLKLNGAHVVVTGGSGGIGKCIAIECYRQGAFITLVARDEDKLLRAKKEV 537
YM+SPLISPKPL L GAHVVVTGGS GIGKCIAIECY+QGAFITLVAR+EDKLL+AKK++
Sbjct: 17 YMVSPLISPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKDI 76
Query: 538 EKFAINDKQVVLCXXXXXXXXYTQVENVIKQAQEKLGPVDMLVNCAGTAVAGKFEEMEVE 717
EK +INDKQVVLC Y QVENVIKQAQEKLGPVDMLVNCAGT+++GKFEE+EV
Sbjct: 77 EKHSINDKQVVLCISVDVSQDYNQVENVIKQAQEKLGPVDMLVNCAGTSMSGKFEELEVS 136
Query: 718 RFKELMELNYLGSVYPTRAVITTMKERRMGRIVFVSS 828
F++LM +NYLGSVYP+RAVITTMKERR+GRIVFVSS
Sbjct: 137 SFEKLMSINYLGSVYPSRAVITTMKERRVGRIVFVSS 173