| EST name | EST sequence |
| gi|186878719|gb|FG103226.1|FG103226 | GGATCCACTCGGGTCAATGGATGAGGACGATCTTGGAATTCCTGCTGGGAAATATTCAAGAATTGAGGATATGAATAATG CACAGAATAAGGAGAGATTCGCTCGTGAGAATCATTCAGAAATTGAACGAAGAAGAAGAAATAAAATGACTCATTATATC AATGAATTAGCAGAGATGGTCCCACAGTGTGCTTCCCTCGGACGGAAACCAGACAAATTGACGATCCTTCGAATGGCTGT TTCCCATATGAAATCGATAAGAGAGACTTCAGCTCACGTTGGAAGTCGTCCTACTTTCCTTTCTGATCAGGAGCTGAAAC ATCTTGTACTGGAAGCAGCAGGGGGATTCCTATTCGTGGTCGATTGTCAGACTGGAAGATTACTCTATGTATCTGATTCA ATCGATAGTCTACTACATGTCAAACAGGAAGATTGGATGGGTCGTAATATTAATGAACTTCTTCATCCTGATGATCACGA TAAGATGCGTGAACAATTGTGTAGTAGTGAGAGTACTTTATCTCGAGTGACAGAACAACAATCGACTAGTGGAGGGAAAA AGGAAAAAGCCCGCGTTCATCTTAGTTGTCGACGTGGTTTCATATGCAGAATGAGAATGGGAAATGTTGATGGACAGGAT AGATTGAGCACTCGTCG |
Most similar to sp|O02748|ARNT_RABIT
>BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q7XCL0|EXLA2_ORYSJ Expansin-like A2 OS=Oryza sativa subsp.
japonica GN=EXLA2 PE=2 SV=1
Length = 275
Score = 153 bits (387), Expect(2) = 7e-43
Identities = 72/91 (79%), Positives = 82/91 (90%)
Frame = +1
Query: 370 GCDRCVRRSKATYQASSLALNAGSCGYGSLAASFNGGFLAAAGPELYRGGVGCGACFQVR 549
GCDRCVRRSKA ++ SS+ALNAGSCGYGSLAASFNGG LAAA P L+RGGVGCGACFQVR
Sbjct: 30 GCDRCVRRSKAGFRDSSIALNAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVR 89
Query: 550 CRDSELCSAAGAKVVVTDQARTSSRTGLALS 642
C+D +LCS AGAKVVVTD+AR+++RT L LS
Sbjct: 90 CKDGKLCSTAGAKVVVTDEARSTNRTDLVLS 120
Score = 42.0 bits (97), Expect(2) = 7e-43
Identities = 20/23 (86%), Positives = 21/23 (91%), Gaps = 1/23 (4%)
Frame = +3
Query: 708 DVEYKRIPCEY-ANRNLSIRVEE 773
DVEYKR+PCEY A RNLSIRVEE
Sbjct: 143 DVEYKRVPCEYAAGRNLSIRVEE 165
>sp|Q10S70|EXLA1_ORYSJ Expansin-like A1 OS=Oryza sativa subsp.
japonica GN=EXLA1 PE=2 SV=1
Length = 279
Score = 147 bits (371), Expect(2) = 7e-41
Identities = 73/97 (75%), Positives = 82/97 (84%), Gaps = 1/97 (1%)
Frame = +1
Query: 355 PAPARGCDRCVRRSKATYQASSLALNAGSCGYGSLAASFNGG-FLAAAGPELYRGGVGCG 531
P A GCDRCVRRS+A Y SSL L AGSCGYG+ AA+FNGG FLAAAGP LYRGGVGCG
Sbjct: 30 PRLASGCDRCVRRSRAAYYTSSLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCG 89
Query: 532 ACFQVRCRDSELCSAAGAKVVVTDQARTSSRTGLALS 642
AC+QVRC+D +LCS AGA+VVVTD+ART +RTGL LS
Sbjct: 90 ACYQVRCKDKKLCSNAGARVVVTDRART-NRTGLVLS 125
Score = 41.6 bits (96), Expect(2) = 7e-41
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = +3
Query: 708 DVEYKRIPCEYANRNLSIRVEE 773
DVEYKR+PCEY +R+LS+RV+E
Sbjct: 148 DVEYKRVPCEYRHRSLSVRVDE 169
>sp|Q9LZT4|EXLA1_ARATH Expansin-like A1 OS=Arabidopsis thaliana
GN=EXLA1 PE=2 SV=1
Length = 265
Score = 105 bits (262), Expect(2) = 4e-28
Identities = 49/90 (54%), Positives = 66/90 (73%)
Frame = +1
Query: 373 CDRCVRRSKATYQASSLALNAGSCGYGSLAASFNGGFLAAAGPELYRGGVGCGACFQVRC 552
CDRC+ RSKA Y +S+ AL++G+C YGS+A SF G +AAA P +Y+ G GCGACFQVRC
Sbjct: 21 CDRCLHRSKAAYFSSASALSSGACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQVRC 80
Query: 553 RDSELCSAAGAKVVVTDQARTSSRTGLALS 642
++ +LCS G V++TD S++T L LS
Sbjct: 81 KNPKLCSTKGTIVMITD-LNKSNQTDLVLS 109
Score = 40.8 bits (94), Expect(2) = 4e-28
Identities = 13/22 (59%), Positives = 21/22 (95%)
Frame = +3
Query: 708 DVEYKRIPCEYANRNLSIRVEE 773
D+EY+R+PC+Y N+N+++RVEE
Sbjct: 134 DIEYQRVPCDYGNKNMNVRVEE 155
>sp|Q9LZT5|EXLA3_ARATH Expansin-like A3 OS=Arabidopsis thaliana
GN=EXLA3 PE=2 SV=1
Length = 263
Score = 105 bits (263), Expect(2) = 5e-28
Identities = 49/90 (54%), Positives = 68/90 (75%)
Frame = +1
Query: 373 CDRCVRRSKATYQASSLALNAGSCGYGSLAASFNGGFLAAAGPELYRGGVGCGACFQVRC 552
CDRC+ RSKA+Y +S+ AL++G+C YG +A SF G +AAA P +Y+ G GCGACFQVRC
Sbjct: 21 CDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQVRC 80
Query: 553 RDSELCSAAGAKVVVTDQARTSSRTGLALS 642
++ +LC++ G V+VTD TS++T L LS
Sbjct: 81 KNPKLCNSKGTIVMVTD-LNTSNQTDLVLS 109
Score = 40.0 bits (92), Expect(2) = 5e-28
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3
Query: 708 DVEYKRIPCEYANRNLSIRVEE 773
DVEY+R+PC Y RNL++RVEE
Sbjct: 134 DVEYQRVPCNYGKRNLNVRVEE 155
>sp|Q9SVE5|EXLA2_ARATH Expansin-like A2 OS=Arabidopsis thaliana
GN=EXLA2 PE=2 SV=1
Length = 265
Score = 103 bits (258), Expect(2) = 4e-27
Identities = 49/93 (52%), Positives = 66/93 (70%)
Frame = +1
Query: 364 ARGCDRCVRRSKATYQASSLALNAGSCGYGSLAASFNGGFLAAAGPELYRGGVGCGACFQ 543
A CDRC+ SKA Y +S+ AL++G+C YGS+A F G +AAA P +Y+ G GCGACFQ
Sbjct: 19 AAACDRCLHSSKAAYFSSASALSSGACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQ 78
Query: 544 VRCRDSELCSAAGAKVVVTDQARTSSRTGLALS 642
VRC++ LCS+ G V+VTD +T ++T L LS
Sbjct: 79 VRCKNPTLCSSKGTTVIVTDLNKT-NQTDLVLS 110
Score = 38.9 bits (89), Expect(2) = 4e-27
Identities = 12/22 (54%), Positives = 20/22 (90%)
Frame = +3
Query: 708 DVEYKRIPCEYANRNLSIRVEE 773
D+EY+R+PC+Y N+ +++RVEE
Sbjct: 135 DIEYRRVPCDYGNKKMNVRVEE 156
>sp|Q8H274|EXLA3_ORYSJ Expansin-like A3 OS=Oryza sativa subsp.
japonica GN=EXLA3 PE=2 SV=1
Length = 276
Score = 101 bits (252), Expect(2) = 7e-26
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 5/91 (5%)
Frame = +1
Query: 364 ARGCDRCVRRSKATYQASSLAL---NAGSCGYGSLAASF--NGGFLAAAGPELYRGGVGC 528
A C+RCVR KA Y S L G CGYG++A NGGFLAA GP +RGG+GC
Sbjct: 26 ASACERCVRNGKAAYSPSLSPLPPGGGGGCGYGAMAMEMELNGGFLAAGGPRQHRGGLGC 85
Query: 529 GACFQVRCRDSELCSAAGAKVVVTDQARTSS 621
G CFQ+RCR++E+CS AG +VV+TD R++S
Sbjct: 86 GRCFQMRCRNAEVCSNAGVRVVLTDFHRSNS 116
Score = 37.0 bits (84), Expect(2) = 7e-26
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 711 VEYKRIPCEYANRNLSIRVEE 773
VEY+RIPC+Y ++NLSI VEE
Sbjct: 146 VEYRRIPCDYKDKNLSILVEE 166
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O02748|ARNT_RABIT Aryl hydrocarbon receptor nuclear translocator
OS=Oryctolagus cuniculus GN=ARNT PE=2 SV=1
Length = 790
Score = 223 bits (569), Expect = 6e-58
Identities = 114/209 (54%), Positives = 149/209 (71%), Gaps = 7/209 (3%)
Frame = +2
Query: 20 DEDDLGIPAGKYSRIEDMNNAQNKERFARENHSEIERRRRNKMTHYINELAEMVPQCASL 199
DED + +++R +D ++ +KER ARENHSEIERRRRNKMT YI EL+++VP C++L
Sbjct: 63 DEDQMSNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDIVPTCSAL 122
Query: 200 GRKPDKLTILRMAVSHMKSIR---ETSAHVGSRPTFLSDQELKHLVLEAAGGFLFVVDCQ 370
RKPDKLTILRMAVSHMKS+R TS +P+FL+DQELKHL+LEAA GFLF+V C+
Sbjct: 123 ARKPDKLTILRMAVSHMKSLRGTGNTSTDGSYKPSFLTDQELKHLILEAADGFLFIVSCE 182
Query: 371 TGRLLYVSDSIDSLLHVKQEDWMGRNINELLHPDDHDKMREQLCSSESTLSRVTEQQSTS 550
TGR++YVSDS+ +L+ Q +W G + + +HPDD DK+REQL +SE+ L+ T
Sbjct: 183 TGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTG 242
Query: 551 GGKKE----KARVHLSCRRGFICRMRMGN 625
KKE R+ + RR FICRMR GN
Sbjct: 243 TVKKEGQQSSMRMCMGSRRSFICRMRCGN 271