miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|86094765|gb|BB905974.1|BB905974 CGACCGCACTCTTACCCAAGGATTAAAGGGTGATCCTACCTACCTTGTGGTAGAGAGCGACAGAACACTTGCAACATTTG
CGATTAATGCCGTATGCACTCACCTCGGGTGTGTCGTGCCGTTTAACACAGCTGAAAAAAAGTTCATCTGCCCATGCCAT
GGATCTCAGTACAATGACCAAGGACGAGTTGTAAGAGGACCCGCTCCCTTGTCTCTTGCATTGGCACATTGTGATGTTGG
TTTAGATGATGGGAAGGTTTTGTTTGTTCCATGGAGCATCACCTGTTCTGAAATCTGTTTCAGTCCAGGTGATGCTCCAT
GGTGGTCTTAGACTTCTTAAACATGTCCCTATATTGTAATATATATTCAAATCTGAAATTCAAACATCTGTTTTTGTATT
AATGCATAAACACATTTTGTAATCAAATCAATATTGTGTATTGAAGCTGGTATAAGGTGAAAACAAAACCTAGATGTTGT
TTTTTTGTCCAT




Most similar to sp|P26291|UCRIA_PEA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P26291|UCRIA_PEA Cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic OS=Pisum sativum GN=petC PE=2 SV=1
          Length = 230

 Score =  200 bits (508), Expect = 4e-51
 Identities = 94/109 (86%), Positives = 97/109 (88%)
 Frame = +2

Query: 2   DRTLTQGLKGDPTYLVVESDRTLATFAINAVCTHLGCVVPFNTAEKKFICPCHGSQYNDQ 181
           DRTLTQGLKGDPTYLVVE DRTLATFAINAVCTHLGCVVPFN AE KFICPCHGSQYNDQ
Sbjct: 126 DRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHGSQYNDQ 185

Query: 182 GRVVRGPAPLSLALAHCDVGLDDGKVLFVPWSITCSEICFSPGDAPWWS 328
           GRVVRGPAPLSLALAHCDVG++DGKV+FVPW     E  F  GDAPWWS
Sbjct: 186 GRVVRGPAPLSLALAHCDVGVEDGKVVFVPW----VETDFRTGDAPWWS 230