miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 165 bits (83), Expect = 2e-41
Identities = 153/175 (87%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 68 aaattgcgagacgaatcttttgagcctaattacgccatgattttacaatatgatgctaca 127
||||||||||||||||||||| ||||||||| | ||||||| | ||||| || |||||||
Sbjct: 60 aaattgcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctaca 119
Query: 128 gtaaacatttgctaataacagattaattaggcttaataaattcgtctcgtagtttcctgg 187
|||||||||||||||| || ||||||||||||||||||||||||||||| ||||| | |
Sbjct: 120 gtaaacatttgctaatgacggattaattaggcttaataaattcgtctcgcagtttacaga 179
Query: 188 cagcatctgtaatttgttttattattggactacgtttaattccttcaaatgtgtg 242
| | ||||||||||||||| ||||| | ||||| |||| | |||||||||||||
Sbjct: 180 cggattctgtaatttgttttgttattagtctacg-ttaaatacttcaaatgtgtg 233
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 121 bits (61), Expect = 3e-28
Identities = 97/109 (88%)
Strand = Plus / Plus
Query: 68 aaattgcgagacgaatcttttgagcctaattacgccatgattttacaatatgatgctaca 127
||||||||||||| ||||||| ||||||||| | |||| |||| ||||| || ||||| |
Sbjct: 15 aaattgcgagacggatcttttaagcctaattgcaccataatttgacaatgtggtgctaaa 74
Query: 128 gtaaacatttgctaataacagattaattaggcttaataaattcgtctcg 176
|||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 75 gtaaacatttgctaatgatggattaattaggcttaataaattcgtctcg 123
>49008_osa-miR445a:pmrd
Length = 268
Score = 119 bits (60), Expect = 1e-27
Identities = 93/104 (89%)
Strand = Plus / Minus
Query: 73 gcgagacgaatcttttgagcctaattacgccatgattttacaatatgatgctacagtaaa 132
||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaa 127
Query: 133 catttgctaataacagattaattaggcttaataaattcgtctcg 176
| ||| |||| | |||||||||||||||| ||||||||||||
Sbjct: 126 cttttcataattatggattaattaggcttaaaaaattcgtctcg 83
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 72 tgcgagacgaatcttttgagcctaatta 99
|||||||||||| |||| ||||||||||
Sbjct: 81 tgcgagacgaattttttaagcctaatta 108
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 99.6 bits (50), Expect = 1e-21
Identities = 110/130 (84%)
Strand = Plus / Plus
Query: 68 aaattgcgagacgaatcttttgagcctaattacgccatgattttacaatatgatgctaca 127
|||| |||||||||||||||| |||||||| |||||| |||| ||||| | || ||||
Sbjct: 14 aaatcgcgagacgaatcttttaggcctaattgcgccataatttaacaatgttgtggtaca 73
Query: 128 gtaaacatttgctaataacagattaattaggcttaataaattcgtctcgtagtttcctgg 187
||||||||||||||| || |||||||||||||| |||||||| ||| | ||||||||
Sbjct: 74 ataaacatttgctaatgacggattaattaggcttcataaattcatcttgcgatttcctgg 133
Query: 188 cagcatctgt 197
||| ||||||
Sbjct: 134 cagaatctgt 143
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 85.7 bits (43), Expect = 1e-17
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 49 aattgcacagtttgcatgcaaattgcgagacgaatcttttgagcctaatta 99
|||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 93 aattgcacagtttgcatggaaatcgcgagacgaatcttttgagcctaatta 43
>49015_osa-miR445h:pmrd
Length = 277
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 73 gcgagacgaatcttttgagcctaattacgccatgatt 109
||||||||||||||||||| |||||||| ||||||||
Sbjct: 182 gcgagacgaatcttttgagtctaattacaccatgatt 146
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 148 gattaattaggcttaataaattcgtctcg 176
|||||||||||||||| ||||||||||||
Sbjct: 124 gattaattaggcttaaaaaattcgtctcg 96
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 72 tgcgagacgaatcttttgagcctaatta 99
|||||||||||| |||| ||||||||||
Sbjct: 94 tgcgagacgaattttttaagcctaatta 121
>49013_osa-miR445f:pmrd
Length = 305
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 73 gcgagacgaatcttttgagcctaattacgccatgatt 109
||||||||||||||||||| |||||||| ||||||||
Sbjct: 197 gcgagacgaatcttttgagtctaattacaccatgatt 161
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 148 gattaattaggcttaataaattcgtc 173
|||||||||||||||| |||||||||
Sbjct: 139 gattaattaggcttaaaaaattcgtc 114
>49012_osa-miR445e:pmrd
Length = 265
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 73 gcgagacgaatcttttgagcctaattacgccatgatt 109
||||||||||||||||||| |||||||| ||||||||
Sbjct: 176 gcgagacgaatcttttgagtctaattacaccatgatt 140
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 148 gattaattaggcttaataaattcgtctcg 176
|||||||||||||||| ||||||||||||
Sbjct: 118 gattaattaggcttaaaaaattcgtctcg 90
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 72 tgcgagacgaatcttttgagcctaatta 99
|||||||||||| |||| ||||||||||
Sbjct: 88 tgcgagacgaattttttaagcctaatta 115
>49009_osa-miR445b:pmrd
Length = 264
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 73 gcgagacgaatcttttgagcctaattacgccatgatt 109
||||||||||||||||||| |||||||| ||||||||
Sbjct: 175 gcgagacgaatcttttgagtctaattacaccatgatt 139
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 148 gattaattaggcttaataaattcgtctcg 176
|||||||||||||||| || |||||||||
Sbjct: 117 gattaattaggcttaaaaagttcgtctcg 89
>49010_osa-miR445c:pmrd
Length = 260
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 74 cgagacgaatcttttgagcctaattacgccatgatt 109
||||||||||||||| ||||||||||| ||||||||
Sbjct: 173 cgagacgaatcttttaagcctaattacaccatgatt 138
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 148 gattaattaggcttaataaattcgtctcg 176
|||||||||||||||| ||||||||||||
Sbjct: 116 gattaattaggcttaaaaaattcgtctcg 88
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 72 tgcgagacgaatcttttgagcctaatta 99
|||||||||||| |||| ||||||||||
Sbjct: 86 tgcgagacgaattttttaagcctaatta 113
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 54.0 bits (27), Expect = 5e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 68 aaattgcgagacgaatcttttgagcctaattacgccatgattt 110
|||| ||||||||||||||||||| ||||||| |||||||||
Sbjct: 118 aaatcgcgagacgaatcttttgagtctaattagcccatgattt 76
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 agacgaatcttttgagcctaatta 99
||||||||||||||||||||||||
Sbjct: 11 agacgaatcttttgagcctaatta 34
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 54.0 bits (27), Expect = 5e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 73 gcgagacgaatcttttgagcctaatta 99
|||||||||||||||||||||||||||
Sbjct: 12 gcgagacgaatcttttgagcctaatta 38
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 62 gcatgcaaattgcgagacgaatcttttgagcctaatta 99
||||| |||| ||||||| |||||||||||||||||||
Sbjct: 128 gcatgtaaatcgcgagacaaatcttttgagcctaatta 91
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 54.0 bits (27), Expect = 5e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 73 gcgagacgaatcttttgagcctaatta 99
|||||||||||||||||||||||||||
Sbjct: 8 gcgagacgaatcttttgagcctaatta 34
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 68 aaattgcgagacgaatcttttgagcctaatta 99
|||| |||||||||||||||| ||||||||||
Sbjct: 121 aaatcgcgagacgaatcttttaagcctaatta 90
Score = 42.1 bits (21), Expect = 2e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 132 acatttgctaataacagattaattaggcttaataaattcgtctcg 176
|||| ||||||| || ||||||||||||| || | ||||||||||
Sbjct: 53 acatgtgctaatgacggattaattaggctcaaaagattcgtctcg 9
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 54.0 bits (27), Expect = 5e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 73 gcgagacgaatcttttgagcctaatta 99
|||||||||||||||||||||||||||
Sbjct: 9 gcgagacgaatcttttgagcctaatta 35
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 74 cgagacgaatcttttgagcctaatta 99
||||||||||||||||||||||||||
Sbjct: 113 cgagacgaatcttttgagcctaatta 88
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 54.0 bits (27), Expect = 5e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 73 gcgagacgaatcttttgagcctaatta 99
|||||||||||||||||||||||||||
Sbjct: 117 gcgagacgaatcttttgagcctaatta 91
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 gagacgaatcttttgagcctaatta 99
|||||||||||||||||||||||||
Sbjct: 14 gagacgaatcttttgagcctaatta 38
Score = 50.1 bits (25), Expect = 8e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 132 acatttgctaataacagattaattaggcttaataaattcgtctcg 176
|||| |||||||||| ||||||||||||| || | ||||||||||
Sbjct: 72 acatgtgctaataacggattaattaggctcaaaagattcgtctcg 116
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 76 agacgaatcttttgagcctaattacgccatgatt 109
|||||||||||||||||||||||| ||||||||
Sbjct: 12 agacgaatcttttgagcctaattagtccatgatt 45
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 68 aaattgcgagacgaatcttttgagcctaattacgccatgatt 109
|||| ||||||| ||||||||||||||||||| ||||||||
Sbjct: 3 aaatcgcgagacaaatcttttgagcctaattagtccatgatt 44
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 73 gcgagacgaatcttttgagcctaatta 99
|||||||||||||||||||| ||||||
Sbjct: 113 gcgagacgaatcttttgagcataatta 87
>49014_osa-miR445g:pmrd
Length = 275
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 148 gattaattaggcttaataaattcgtctcg 176
|||||||||||||||| ||||||||||||
Sbjct: 123 gattaattaggcttaaaaaattcgtctcg 95
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 76 agacgaatcttttgagcctaattacgccatgatt 109
|||||||||||||||| ||||||| ||||||||
Sbjct: 178 agacgaatcttttgagtttaattacaccatgatt 145
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 72 tgcgagacgaatcttttgagcctaatta 99
|||||||||||| |||| ||||||||||
Sbjct: 93 tgcgagacgaattttttaagcctaatta 120
>49011_osa-miR445d:pmrd
Length = 312
Score = 46.1 bits (23), Expect = 1e-05
Identities = 74/91 (81%)
Strand = Plus / Plus
Query: 73 gcgagacgaatcttttgagcctaattacgccatgattttacaatatgatgctacagtaaa 132
|||||| |||||| ||||| ||||||| | |||||| | || |||||||||| ||||
Sbjct: 103 gcgagatgaatctattgagtctaattaatcaatgattagcctatgtgatgctacactaaa 162
Query: 133 catttgctaataacagattaattaggcttaa 163
||| || |||| | ||||||||||||||||
Sbjct: 163 catgtgttaattatggattaattaggcttaa 193
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 73 gcgagacgaatcttttgagcctaattacgccatgatt 109
||||||| ||||| ||||||||||||| ||||||||
Sbjct: 11 gcgagacaaatctattgagcctaattaatccatgatt 47
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 8e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 74 cgagacgaatcttttgagcctaattacgccatgatt 109
|||||| ||||||||||| ||||||| ||||||||
Sbjct: 3 cgagacaaatcttttgagtctaattagtccatgatt 38
